Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93618 | Canola | cytosol | 83.33 | 69.44 |
| CDX73200 | Canola | cytosol | 83.33 | 66.23 |
| CDY59983 | Canola | cytosol | 82.92 | 65.89 |
| CDX99605 | Canola | cytosol | 77.08 | 64.91 |
| CDX95126 | Canola | cytosol | 87.92 | 39.07 |
| Bra018683.1-P | Field mustard | cytosol | 87.5 | 38.96 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 84.58 | 37.38 |
| PGSC0003DMT400078144 | Potato | cytosol | 68.75 | 30.84 |
| Solyc06g075600.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 68.33 | 30.65 |
| CDX71059 | Canola | plastid | 67.5 | 29.67 |
| GSMUA_Achr8P02120_001 | Banana | cytosol | 66.25 | 29.55 |
| TraesCS4B01G202300.1 | Wheat | cytosol | 65.83 | 29.26 |
| Solyc06g005240.2.1 | Tomato | cytosol | 54.58 | 29.11 |
| CDX88738 | Canola | plastid | 65.0 | 29.1 |
| TraesCS4D01G203200.1 | Wheat | cytosol | 65.42 | 29.07 |
| Solyc11g072960.1.1 | Tomato | cytosol | 64.17 | 29.0 |
| TraesCS4A01G102300.1 | Wheat | cytosol | 65.42 | 28.75 |
| PGSC0003DMT400040191 | Potato | cytosol | 63.75 | 28.54 |
| CDY10435 | Canola | cytosol | 60.83 | 27.7 |
| Os03t0281100-00 | Rice | cytosol | 65.0 | 27.61 |
| CDY70132 | Canola | cytosol | 60.42 | 27.51 |
| PGSC0003DMT400025094 | Potato | cytosol | 61.67 | 27.41 |
| Zm00001d028680_P001 | Maize | cytosol | 63.33 | 27.05 |
| GSMUA_Achr6P33230_001 | Banana | cytosol | 66.25 | 26.81 |
| EER95066 | Sorghum | cytosol | 62.08 | 26.28 |
| HORVU4Hr1G058450.9 | Barley | plastid | 65.0 | 25.37 |
| CDY15549 | Canola | cytosol | 57.92 | 24.91 |
| CDY58363 | Canola | cytosol | 57.08 | 24.64 |
| CDX86566 | Canola | cytosol | 57.92 | 24.09 |
| GSMUA_Achr9P04150_001 | Banana | plasma membrane | 65.0 | 23.71 |
| CDY19113 | Canola | cytosol | 57.5 | 21.87 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 55.0 | 21.22 |
| CDY17652 | Canola | cytosol | 46.67 | 21.01 |
| CDY36249 | Canola | cytosol | 46.67 | 20.93 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 51.25 | 19.62 |
| CDY42145 | Canola | cytosol | 46.67 | 19.15 |
| CDY50335 | Canola | cytosol | 46.25 | 18.85 |
| CDY50551 | Canola | cytosol | 46.25 | 18.85 |
| CDY07932 | Canola | nucleus, plastid | 46.25 | 18.53 |
| CDX73985 | Canola | nucleus | 46.25 | 18.23 |
| CDY08436 | Canola | cytosol | 46.25 | 16.82 |
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 10.42 | 16.13 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 21.67 | 11.35 |
| CDY20943 | Canola | cytosol | 26.25 | 10.96 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 25.0 | 10.62 |
| CDY58683 | Canola | cytosol | 13.33 | 10.49 |
| CDY48208 | Canola | cytosol | 27.08 | 10.43 |
| CDY39673 | Canola | plasma membrane | 25.83 | 10.33 |
| CDY20635 | Canola | plasma membrane | 24.58 | 10.12 |
| CDY35767 | Canola | cytosol, peroxisome, plasma membrane | 25.42 | 9.97 |
| CDY69308 | Canola | plasma membrane | 24.58 | 9.95 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 23.75 | 9.86 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 24.17 | 9.83 |
| CDY40662 | Canola | plasma membrane | 23.33 | 9.71 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 22.92 | 9.53 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 21.67 | 9.22 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 22.5 | 8.35 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 22.5 | 7.65 |
| CDY21967 | Canola | plasma membrane | 22.08 | 7.02 |
| CDY45914 | Canola | cytosol | 12.08 | 6.61 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 17.08 | 5.79 |
| CDY20642 | Canola | nucleus | 25.83 | 4.34 |
| CDY16446 | Canola | cytosol | 0.0 | 0.0 |
| CDY58682 | Canola | cytosol | 0.0 | 0.0 |
| CDY21969 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | GO:A0A078IXR7 | UniProt:A0A078IXR7 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:At2g01680/At5g02620 | EnsemblPlants:CDY55069 | ProteinID:CDY55069 | ProteinID:CDY55069.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00015026001 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24186 | PANTHER:PTHR24186:SF10 | SMART:SM00248 | SUPFAM:SSF48403 |
| TMHMM:TMhelix | UniParc:UPI0004EE842E | SEG:seg | : | : | : |
Description
BnaCnng28210DBnaCnng28210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXR7]
Coordinates
chrLK033374:-:45698..46564
Molecular Weight (calculated)
26280.3 Da
IEP (calculated)
9.496
GRAVY (calculated)
0.231
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKGQTALH MAAKGTNVEV VEELIKADRS SINIADTKGN TALHIAARKG RSHIVKLLLD NNITDTKAVN RTGETALDTV EKVGNPETRR RVQGIAKVLN
101: KMHTEGLNNA INSTTVVAVL IATVAFAAIF TVPGQYVEDT GNLPDGHSLG EANIASTTPF IIFFIFDSIA LFISLAVVVD QTSVVVIESK AKKQMMAVIN
201: KLMWLACVLM RSHLRFEEDL NLSKMVLMLK VLMLTYIFGW
101: KMHTEGLNNA INSTTVVAVL IATVAFAAIF TVPGQYVEDT GNLPDGHSLG EANIASTTPF IIFFIFDSIA LFISLAVVVD QTSVVVIESK AKKQMMAVIN
201: KLMWLACVLM RSHLRFEEDL NLSKMVLMLK VLMLTYIFGW
001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.