Factsheet for GSMUA_Achr6P33230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02120_001	Banana	cytosol	78.08	86.06
TraesCS4B01G202300.1	Wheat	cytosol	67.96	74.63
TraesCS4D01G203200.1	Wheat	cytosol	67.79	74.44
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	66.44	72.69
GSMUA_Achr9P04150_001	Banana	plasma membrane	80.44	72.49
TraesCS4A01G102300.1	Wheat	cytosol	66.61	72.34
KRH22984	Soybean	cytosol	66.27	72.11
KRH10329	Soybean	cytosol	65.43	71.19
VIT_08s0040g02760.t01	Wine grape	cytosol	64.25	70.43
Os03t0281100-00	Rice	cytosol	66.78	70.09
Zm00001d028680_P001	Maize	cytosol	66.27	69.93
KRG88671	Soybean	cytosol, plastid	64.59	69.76
KRH25003	Soybean	cytosol, plastid	63.74	68.98
EER95066	Sorghum	cytosol	65.94	68.96
PGSC0003DMT400078144	Potato	cytosol	62.06	68.78
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	61.89	68.6
CDX93618	Canola	cytosol	33.05	68.06
Bra018683.1-P	Field mustard	cytosol	61.05	67.16
CDX95126	Canola	cytosol	60.88	66.85
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	61.05	66.67
CDY55069	Canola	cytosol, peroxisome, plasma membrane	26.81	66.25
Solyc11g072960.1.1	Tomato	cytosol	58.18	64.97
PGSC0003DMT400040191	Potato	cytosol	58.52	64.74
KRH67582	Soybean	cytosol	55.99	63.72
PGSC0003DMT400025094	Potato	cytosol	58.01	63.7
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	25.13	63.68
CDX88738	Canola	plastid	56.49	62.5
Bra006680.1-P	Field mustard	plastid	57.5	62.45
CDX71059	Canola	plastid	57.34	62.27
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	55.31	61.89
AT5G60070.1	Thale cress	cytosol, plastid	56.66	61.31
PGSC0003DMT400061439	Potato	cytosol, peroxisome, plasma membrane	55.82	61.18
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	55.82	61.18
Solyc06g005240.2.1	Tomato	cytosol	45.87	60.44
Bra009576.1-P	Field mustard	cytosol	50.93	57.31
CDY70132	Canola	cytosol	50.93	57.31
CDY10435	Canola	cytosol	50.76	57.12
AT5G02620.5	Thale cress	cytosol	51.94	56.31
HORVU4Hr1G058450.9	Barley	plastid	57.34	55.28
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	50.76	52.17
CDX99605	Canola	cytosol	24.11	50.18
CDY59983	Canola	cytosol	25.3	49.67
CDX73200	Canola	cytosol	25.13	49.34
GSMUA_Achr9P04170_001	Banana	cytosol	41.99	48.82
GSMUA_Achr11P...	Banana	cytosol	39.8	48.07
GSMUA_Achr7P23730_001	Banana	cytosol	25.3	47.32
GSMUA_Achr6P34410_001	Banana	cytosol	40.47	47.06
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	50.93	46.46
GSMUA_Achr5P07190_001	Banana	cytosol	40.47	45.63
GSMUA_Achr6P33220_001	Banana	cytosol	41.99	45.52
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	39.46	45.09
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	41.15	43.73
GSMUA_Achr9P02700_001	Banana	cytosol	15.01	23.12
GSMUA_Achr9P02720_001	Banana	cytosol	14.67	22.36
GSMUA_Achr9P02740_001	Banana	cytosol	21.92	22.15
GSMUA_Achr9P03090_001	Banana	cytosol	30.19	21.39
GSMUA_Achr7P12630_001	Banana	cytosol	21.75	19.82
GSMUA_Achr9P02690_001	Banana	plasma membrane	19.06	19.62

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSMUA_Achr6G33230_001	EnsemblPlants:GSMUA_Achr6P33230_001	EnsemblPlants:GSMUA_Achr6T33230_001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
UniProt:M0TCB6	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000295FBCA
SEG:seg	:	:	:	:	:

Description

Putative Ankyrin repeat-containing protein At5g02620 [Source:GMGC_GENE;Acc:GSMUA_Achr6G33230_001]

Coordinates

chr6:+:32357640..32360300

Molecular Weight (calculated)

65394.2 Da

IEP (calculated)

9.199

GRAVY (calculated)

0.039

Length

593 amino acids

Sequence
(BLAST)

001: MDSSVGRQSF RRKKMTKQLT GKRDDTPLHS AARSGNLAVV NGLLSGADDE DLKELLSRQN QAGETALFVA AEYGYVDVVQ EMIKYYDVAA AGIKAKNGYD
101: ALHIAAKQGD VDVVKELLNA LPELSLTVDL SNTTALHTAA AQGHIEVVNL LLEADKSLAL IAKSNGKTAL HSAARNGHLE VVKSLLRKES GIAARTDKKG
201: QTALHMAAKG TSLDLVQELL ENEPSLLNLV DTKGNTALHI AARKSRAQCV AGSEFEYRLH HLSFVKEYIY IYIYIYIYIY IYNESLQSTI FFEWTVTCWS
301: NGLLQIVRRL LEFKELETKA INKSGETALD TAEKMGNSDV TGMLLEHGVQ SARAIRPSPN PARELKQTVS DIKHEVHSQL EHTRQTRRRV QGIAKRLNKL
401: HEDGLNNAIN SNTVVAVLIA TVAFAAIFTV PGEYVESDNL APGLTLGEAN VAHQTPFMIF FVFDSVALFI SLAVVVVQTS VVVIESKAKK QMMAIINKLM
501: WIACVLISIA FLALCFIVVG RSQRWLAIGV TIMGTVILAT TLATMLYWVI AHRIEAKKLR NIRRSSLSRS RSWSASGVSD SELFNSEYKM YAI

Best Arabidopsis Sequence Match ( AT5G02620.5 )
(BLAST)

001: MKEIKKTMTK QMTARRDDTP LHTAVREGKT DLLLEMIGEH DGVELKELLA EQNQSGETAL YVAAEYGYTD MVKILMKHSD SVLAGTKAKN GFDAFHIAAK
101: NGNLQVLDVL IEANPELSFT FDSSKTTALH TAASQGHGEI VCFLLDKGVD LAAIARSNGK TALHSAARNG HTVIVKKLIE KKAGMVTRVD KKGQTALHMA
201: VKGQNTEIVD VLMEADGSLI NSADNKGNTP LHIAVRKNRA EVIVDQSFKL FLLQKLESFL YSLQIVQTVL KYCEVSRVAV NKSGETALDI AEKTGLHEIV
301: PLLQKIGMQN ARSIKPAEKV EPSGSSRKLK ETVSEIGHEV HTQLEQTGRT RREIQGIAKR VNKMHTEGLN NAINSTTLVA ILIATVAFAA IFNVPGQYTD
401: DPKDVPPGYS LGEARAAPRP EFLIFVVFDS FALFISLAVV VVQTSVVVIE RRAKKQMMAI INKLMWMACI MISVAFVSLS FVVVGEKEKP LAVGVTAIGA
501: LIMVSTLGTM CYWVIANRIE GSKSSPASMM SDPELADSKH NRKLYAV

Arabidopsis Description

ANK1ankyrin-like1 [Source:TAIR;Acc:AT5G02620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.