Factsheet for Solyc09g005860.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1
nucleus 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400061439	Potato	cytosol, peroxisome, plasma membrane	98.52	98.52
VIT_08s0040g02760.t01	Wine grape	cytosol	66.73	66.73
KRH67582	Soybean	cytosol	63.22	65.64
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	63.03	64.34
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	62.11	62.8
GSMUA_Achr8P02120_001	Banana	cytosol	61.0	61.34
Solyc11g072960.1.1	Tomato	cytosol	57.67	58.76
TraesCS4B01G202300.1	Wheat	cytosol	57.3	57.41
TraesCS4D01G203200.1	Wheat	cytosol	57.12	57.22
CDY10435	Canola	cytosol	55.27	56.74
CDY70132	Canola	cytosol	55.27	56.74
Solyc06g005240.2.1	Tomato	cytosol	46.95	56.44
Bra009576.1-P	Field mustard	cytosol	54.9	56.36
TraesCS4A01G102300.1	Wheat	cytosol	56.56	56.04
GSMUA_Achr6P33230_001	Banana	cytosol	61.18	55.82
Os03t0281100-00	Rice	cytosol	58.23	55.75
Zm00001d028680_P001	Maize	cytosol	57.12	54.98
AT5G02620.5	Thale cress	cytosol	55.45	54.84
EER95066	Sorghum	cytosol	56.56	53.97
Solyc08g014570.2.1	Tomato	cytosol, peroxisome, plasma membrane	52.13	50.18
Solyc12g096670.1.1	Tomato	cytosol	52.5	49.48
Solyc12g019060.1.1	Tomato	cytosol	51.94	49.3
GSMUA_Achr9P04150_001	Banana	plasma membrane	59.15	48.63
HORVU4Hr1G058450.9	Barley	plastid	47.87	42.11
Solyc01g005340.2.1	Tomato	plasma membrane	40.67	42.06
Solyc05g054830.2.1	Tomato	nucleus	43.99	40.75
Solyc10g084550.1.1	Tomato	plastid	42.33	39.15
Solyc08g066770.2.1	Tomato	cytosol	27.54	24.55
Solyc07g061760.1.1	Tomato	cytosol	11.09	22.39
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	19.59	20.5
Solyc07g061750.2.1	Tomato	cytosol	19.41	18.1

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:K4CQ76	PFAM:PF12796	PFAM:PF13857	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF4	SMART:SM00248
SUPFAM:SSF48403	EnsemblPlantsGene:Solyc09g005860.2	EnsemblPlants:Solyc09g005860.2.1	TMHMM:TMhelix	UniParc:UPI000276B31D	SEG:seg

Description

No Description!

Coordinates

chr9:+:602117..604953

Molecular Weight (calculated)

59547.5 Da

IEP (calculated)

9.801

GRAVY (calculated)

0.011

Length

541 amino acids

Sequence
(BLAST)

001: MDSSVVQQNV CVKKMTKQLT GKRGDTQIHS VVRSGNLELV LEIITCCNEA ELIELLSKQN QSGENALYVA AESGDLVLVK ELIKYYDIGL ASIKARNGYD
101: AFHVAAKQGD FEMVKVLLEA FPQLSVTFDQ SNSTALHTAS AQGHIDVVNF LLETNSSLAT IPKNNGKTAL HSSARNGHVA VVKALLSKEE GILNWRDKKG
201: QTALHMAVKG QSVDVVNELI LSDPTLATII DGKGNTALHI ATRKGRVEIV QAVVKDKRMK WDAINKSGET ALDVAEKARN SEIAAILKEH GVLTAKNMKL
301: ALPTRSAKEL KQTVSDIKHD VHNQLEHTFQ TQKRVKNIAK RLNKMHTEGL NNAINSTTVV AVLIATVTFA AIFNLPGQYT DNPKEIPPGY SIGEGRIAPQ
401: PPFVIFFIFD SLALFISLAV VVVQTSIVVV ERRAKKQMMA IINKLMWLAC VFVSVAFLAL SYIVIGKDER WMASAVTFMG TFIMVATLGT LCYWVVMHRI
501: ESSNLRSQRK SARSSKTLSR SVSIMSESEI PEDQYKKLYA I

Best Arabidopsis Sequence Match ( AT1G07710.2 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.