CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
endoplasmic reticulum 1
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028680_P001	Maize	cytosol	90.3	91.1
TraesCS4D01G203200.1	Wheat	cytosol	78.48	82.41
TraesCS4B01G202300.1	Wheat	cytosol	78.31	82.22
TraesCS4A01G102300.1	Wheat	cytosol	77.6	80.59
Os03t0281100-00	Rice	cytosol	80.25	80.53
GSMUA_Achr8P02120_001	Banana	cytosol	68.61	72.3
GSMUA_Achr6P33230_001	Banana	cytosol	68.96	65.94
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	62.96	65.87
KRH22984	Soybean	cytosol	62.96	65.5
KRH10329	Soybean	cytosol	62.08	64.59
KRG88671	Soybean	cytosol, plastid	61.9	63.93
CDX93618	Canola	cytosol	32.45	63.89
KRH25003	Soybean	cytosol, plastid	61.2	63.32
PGSC0003DMT400078144	Potato	cytosol	59.26	62.8
VIT_08s0040g02760.t01	Wine grape	cytosol	59.44	62.29
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	58.73	62.24
CDY55069	Canola	cytosol, peroxisome, plasma membrane	26.28	62.08
Solyc11g072960.1.1	Tomato	cytosol	58.02	61.96
HORVU4Hr1G058450.9	Barley	plastid	67.2	61.95
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	58.91	61.51
Bra018683.1-P	Field mustard	cytosol	58.38	61.41
CDX95126	Canola	cytosol	58.38	61.3
PGSC0003DMT400040191	Potato	cytosol	57.67	61.01
AT5G60070.1	Thale cress	cytosol, plastid	56.08	58.03
KRH67582	Soybean	cytosol	53.26	57.97
PGSC0003DMT400025094	Potato	cytosol	55.2	57.96
CDX71059	Canola	plastid	55.73	57.88
Bra006680.1-P	Field mustard	plastid	55.73	57.88
CDX88738	Canola	plastid	54.5	57.65
GSMUA_Achr9P04150_001	Banana	plasma membrane	65.96	56.84
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	53.97	56.56
PGSC0003DMT400061439	Potato	cytosol, peroxisome, plasma membrane	53.97	56.56
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	52.73	56.42
Solyc06g005240.2.1	Tomato	cytosol	44.27	55.78
Bra009576.1-P	Field mustard	cytosol	49.56	53.32
CDY70132	Canola	cytosol	49.56	53.32
CDY10435	Canola	cytosol	49.56	53.32
AT5G02620.5	Thale cress	cytosol	50.26	52.1
EES15259	Sorghum	cytosol	48.85	49.29
EER97054	Sorghum	cytosol	48.5	48.93
CDY59983	Canola	cytosol	24.69	46.36
CDX99605	Canola	cytosol	23.28	46.32
CDX73200	Canola	cytosol	24.52	46.03
EES03848	Sorghum	cytosol	41.27	42.09
EES07299	Sorghum	cytosol, plasma membrane	38.45	41.21
EER95067	Sorghum	cytosol, nucleus, plasma membrane	40.74	33.58
OQU83151	Sorghum	cytosol	7.05	27.4
KXG36379	Sorghum	cytosol	15.17	21.55
EER90917	Sorghum	cytosol, peroxisome, plasma membrane	20.63	21.04
KXG28091	Sorghum	cytosol, peroxisome, plasma membrane	21.34	20.37
EER90916	Sorghum	cytosol	20.11	20.18
OQU83144	Sorghum	cytosol	13.93	19.65
KXG28826	Sorghum	cytosol, peroxisome, plasma membrane	13.93	19.51
OQU89270	Sorghum	cytosol	18.69	18.86
KXG27928	Sorghum	plasma membrane	21.87	18.67
KXG24315	Sorghum	cytosol, peroxisome, plasma membrane	20.11	18.48
OQU79686	Sorghum	cytosol, peroxisome, plasma membrane	17.81	18.36
OQU83143	Sorghum	cytosol	11.29	18.34
OQU83029	Sorghum	cytosol, peroxisome, plasma membrane	21.69	18.2
EER97319	Sorghum	plastid	20.99	18.03
OQU80298	Sorghum	mitochondrion, plastid	21.87	17.84
KXG36384	Sorghum	cytosol	12.35	17.54
KXG28374	Sorghum	cytosol, peroxisome, plasma membrane	19.93	17.28
KXG21092	Sorghum	cytosol, peroxisome, plasma membrane	18.87	17.07
EER89595	Sorghum	cytosol	11.29	16.93
OQU78058	Sorghum	plasma membrane	18.17	16.45
OQU84108	Sorghum	cytosol, nucleus, plasma membrane	21.87	16.29
OQU84849	Sorghum	plasma membrane	17.99	16.01
EES18294	Sorghum	plasma membrane	19.58	15.88
EER88274	Sorghum	cytosol	20.46	15.3
EER96593	Sorghum	plasma membrane	12.52	14.67
EER87700	Sorghum	cytosol	20.63	14.52
EER87702	Sorghum	nucleus	18.34	14.13
OQU83139	Sorghum	cytosol	5.11	12.95
KXG28093	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	19.93	12.1

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
UniProt:C5WPA1	EnsemblPlants:EER95066	ProteinID:EER95066	ProteinID:EER95066.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	ProteinID:KXG39650.1	PFAM:PF12796	PFAM:PF13637	PFAM:PF13962	InterPro:PGG_dom
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	EnsemblPlantsGene:SORBI_3001G414400
SUPFAM:SSF48403	unigene:Sbi.20398	TMHMM:TMhelix	UniParc:UPI0001A8305C	RefSeq:XP_002468068.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:69613172..69616908

Molecular Weight (calculated)

61731.7 Da

IEP (calculated)

10.061

GRAVY (calculated)

-0.142

Length

567 amino acids

Sequence
(BLAST)

001: MEAKNQTGGD EECSRPQQQP VVMDSPRAAQ AATRRKKMTK QLTGKRDDTA MHAAARAGQL ASMREMMSGK DAEELGALLS RQNQAGETPL FVAAEYGYVA
101: LVGEMIRCHD VATASIKARS GYDALHIAAK QGDVDVVREL LQALPQLSLT VDSSNTTALN SAATQGHLDV VRLLLQVDRS LALIARSNGK TALHSAARNG
201: HVEVVRALLE AEPSIALRTD KKGQTALHMA SKATRLDLVD ALLAAEPALL NQKDNKGNTA LHIAARKARH EIIRRLVTMP DTDLKAINRS GETPLDTAEK
301: MGNGDAAELL AEHGVQSARA ISPGAGGGNN KQQRELKQQV SDIKHEVHSQ LEQTRQTRVR MQGIAKRINK LHEEGLNNAI NSTTVVAVLI ATVAFAGIFT
401: VPGEYVEDPR SSLTPGKDVG EANISHQTAF IIFFVFDSVS LFISLAVVVV QTSVVVIERK AKKQMMAVIN KLMWVACVLI SVSFLALSFV VVGRAERWLA
501: VSVTIMGTTI LATTIGTMLY WVIAHRMEAK RIRTNKRNRL SRSRSLSISG MSEGEWVEEE YKRMYAI

Best Arabidopsis Sequence Match ( AT1G07710.2 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.