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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G089710.1 Barley cytosol, extracellular 22.56 72.83
TraesCS3B01G599300.1 Wheat plasma membrane, vacuole 25.25 70.75
OQU83144 Sorghum cytosol 45.79 67.66
TraesCS3D01G535100.1 Wheat cytosol, peroxisome, plasma membrane 35.69 62.54
TraesCS3A01G529700.1 Wheat cytosol, peroxisome, plasma membrane 61.11 62.16
Os11t0251400-02 Rice cytosol, peroxisome, plasma membrane 60.44 61.47
TraesCSU01G140300.1 Wheat cytosol, peroxisome, plasma membrane 58.25 61.46
TraesCS1D01G379500.2 Wheat cytosol 60.27 61.2
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 56.57 61.09
HORVU6Hr1G000310.2 Barley cytosol, peroxisome 58.59 60.95
HORVU3Hr1G115720.2 Barley cytosol, peroxisome, plasma membrane 59.76 60.79
EER89595 Sorghum cytosol 38.05 59.79
HORVU3Hr1G115640.1 Barley plastid 58.42 59.42
HORVU3Hr1G115700.1 Barley cytosol, plastid 57.41 58.69
TraesCS3D01G533500.1 Wheat cytosol 57.07 57.46
TraesCS3B01G599100.1 Wheat cytosol 37.71 55.58
HORVU3Hr1G115520.15 Barley mitochondrion, peroxisome, plastid 57.41 55.54
HORVU3Hr1G115780.11 Barley plastid 56.9 53.82
TraesCS3D01G455500.1 Wheat cytosol 53.7 53.08
OQU83139 Sorghum cytosol 19.53 51.79
TraesCS3A01G529300.1 Wheat plasma membrane 40.74 51.27
TraesCS3D01G534600.1 Wheat plasma membrane 52.02 50.99
TraesCS3B01G584200.1 Wheat plasma membrane 40.57 48.2
OQU83151 Sorghum cytosol 10.61 43.15
OQU83143 Sorghum cytosol 23.23 39.54
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 59.43 37.79
EER90917 Sorghum cytosol, peroxisome, plasma membrane 26.09 27.88
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 18.18 26.67
KXG36379 Sorghum cytosol 17.68 26.32
VIT_05s0124g00670.t01 Wine grape cytosol 25.42 26.08
VIT_14s0081g00350.t01 Wine grape cytosol 23.4 26.03
EER90916 Sorghum cytosol 24.75 26.02
GSMUA_Achr9P02700_001 Banana cytosol 16.67 25.71
GSMUA_Achr7P12630_001 Banana cytosol 27.95 25.5
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 24.41 25.17
VIT_12s0028g04020.t01 Wine grape plasma membrane 13.3 24.84
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 21.38 24.71
GSMUA_Achr9P02720_001 Banana cytosol 16.16 24.68
GSMUA_Achr9P02740_001 Banana cytosol 24.24 24.53
VIT_19s0014g05330.t01 Wine grape extracellular 23.23 23.83
GSMUA_Achr9P02690_001 Banana plasma membrane 23.06 23.78
VIT_12s0059g00130.t01 Wine grape cytosol 15.15 23.62
Bra023774.1-P Field mustard plasma membrane 24.24 23.61
OQU89270 Sorghum cytosol 22.22 23.49
EES15259 Sorghum cytosol 21.89 23.13
VIT_05s0165g00140.t01 Wine grape cytosol 18.01 22.96
VIT_05s0124g00720.t01 Wine grape cytosol 14.65 22.89
KXG36384 Sorghum cytosol 15.32 22.81
Solyc07g061750.2.1 Tomato cytosol 22.22 22.76
VIT_13s0047g01220.t01 Wine grape plasma membrane 23.74 22.74
VIT_12s0059g00150.t01 Wine grape cytosol 14.81 22.74
EES07299 Sorghum cytosol, plasma membrane 20.2 22.68
PGSC0003DMT400071072 Potato cytosol 13.97 22.43
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 23.23 22.4
VIT_12s0059g00110.t01 Wine grape cytosol 14.48 22.22
VIT_14s0081g00390.t01 Wine grape cytosol 19.19 22.22
VIT_05s0102g00050.t01 Wine grape nucleus 22.39 22.13
VIT_05s0102g00030.t01 Wine grape cytosol 21.89 22.03
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 21.55 21.99
VIT_05s0165g00290.t01 Wine grape cytosol 22.22 21.96
OQU80298 Sorghum mitochondrion, plastid 25.59 21.87
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 23.23 21.8
VIT_12s0059g00060.t01 Wine grape cytosol 18.86 21.79
VIT_12s0059g00090.t01 Wine grape cytosol 13.13 21.73
EER97054 Sorghum cytosol 20.54 21.71
VIT_05s0165g00010.t01 Wine grape nucleus 16.84 21.69
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 21.38 21.64
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 18.86 21.41
VIT_12s0028g03960.t01 Wine grape plasma membrane 14.98 21.39
EER97319 Sorghum plastid 23.74 21.36
OQU84849 Sorghum plasma membrane 22.9 21.35
VIT_14s0081g00420.t01 Wine grape cytosol 21.38 21.34
VIT_05s0029g01420.t01 Wine grape cytosol 23.57 21.34
EER95066 Sorghum cytosol 20.37 21.34
VIT_05s0165g00060.t01 Wine grape cytosol 9.09 21.26
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 23.4 21.25
EES03848 Sorghum cytosol 19.87 21.22
AT4G03460.1 Thale cress peroxisome 22.39 21.18
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 21.72 21.08
VIT_12s0059g00050.t01 Wine grape plasma membrane 22.9 21.02
OQU84108 Sorghum cytosol, nucleus, plasma membrane 26.77 20.89
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 23.74 20.86
Bra033416.1-P Field mustard cytosol 19.7 20.86
EES18294 Sorghum plasma membrane 24.24 20.6
EER88274 Sorghum cytosol 26.26 20.58
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 23.06 20.54
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 17.85 20.5
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 23.74 20.17
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 22.56 20.12
VIT_12s0028g03990.t01 Wine grape cytosol 20.03 20.07
VIT_14s0081g00360.t01 Wine grape cytosol 14.14 20.0
VIT_05s0029g01490.t01 Wine grape cytosol 15.99 19.96
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 22.73 19.94
VIT_05s0029g01540.t01 Wine grape plasma membrane 22.22 19.79
Bra034209.1-P Field mustard cytosol 20.71 19.71
OQU78058 Sorghum plasma membrane 20.71 19.65
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 20.71 19.62
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 20.37 19.61
Bra000823.1-P Field mustard plasma membrane 14.65 19.59
KXG27928 Sorghum plasma membrane 21.89 19.58
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 21.21 19.33
EER87700 Sorghum cytosol 25.93 19.11
VIT_14s0081g00370.t01 Wine grape cytosol 10.94 19.06
EER87702 Sorghum nucleus 23.57 19.02
EER96593 Sorghum plasma membrane 15.49 19.01
VIT_05s0124g00460.t01 Wine grape cytosol 8.59 18.89
AT4G05040.1 Thale cress cytosol 18.01 18.71
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 23.74 18.36
AT4G14390.1 Thale cress plasma membrane 21.21 18.16
AT4G03450.1 Thale cress plasma membrane 19.36 17.94
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 20.2 17.91
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 21.38 17.89
VIT_12s0028g04010.t01 Wine grape cytosol 13.47 17.86
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 20.71 17.15
AT4G03480.1 Thale cress mitochondrion 18.86 17.0
EER95067 Sorghum cytosol, nucleus, plasma membrane 19.53 16.86
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 19.87 16.74
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 19.19 16.69
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 22.9 16.52
AT4G03440.1 Thale cress cytosol 20.54 16.25
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 22.73 15.24
VIT_12s0059g00120.t01 Wine grape cytosol 17.51 12.61
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1B6PQZ9InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:KXG28091ProteinID:KXG28091ProteinID:KXG28091.1
PFAM:PF12796PFAM:PF13857PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24177PANTHER:PTHR24177:SF50SMART:SM00248EnsemblPlantsGene:SORBI_3005G083800SUPFAM:SSF48403TMHMM:TMhelix
UniParc:UPI00081ABE03SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:+:11308005..11312755
Molecular Weight (calculated)
65229.5 Da
IEP (calculated)
8.666
GRAVY (calculated)
0.063
Length
594 amino acids
Sequence
(BLAST)
001: MPASIDPCPA ANCQIMEAGK KTATMMDSRL LDAAVSGDTT MMKHLALHDP AVLLGTTPRG NTCLHISAMH GHAGFCMDAM ALNRSLLSAV NNDGETPLVA
101: AVRGGRTSTT SLAPSFLRCY RDLHLSEAIL KQDKQGNNAL HHAIRSGHRE LALELIAAEP ALSKAVNKYD ESPMYIAVMR NYKDVSEKLL EIPDSAHLGG
201: TNGHNALHAA VRNGTAAIAK KIVETRPALA LTEDKIRKAT PLHQAVLWDK VDVLRVILEH DRSLGYVVSS KGTPLLVSAA YRGNVGVARE LLKHCPDAPF
301: AKTNGWTCLH QAVWNGQLEF VDFVLGLPQF GRFLINMRDQ DGDTALHLAV QKSNPKMVAA LLLHRDIDVR VLNDNGNEAI WKLWNVTKDS KTLNWNEISM
401: LMLKADPQAA TDIYNLRREA HDKVTETTRN DIKSLTQTYT GNTSLVAILI ATITFAAAFT LPGGYSADPG NEGLPIMARK FAFKAFLISD TLAMCSSLVV
501: AFVCIIARLE DLEFLLHYRS FTKKLMWFAY MATTTAFATG LYTVLAPRLL WLAVAICVLT TSLPILTKLL GEWPILRLRL RLGRTFKSDL LDMV
Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)
001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.