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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU89270 Sorghum cytosol 35.83 44.31
OQU84849 Sorghum plasma membrane 35.25 38.46
OQU84108 Sorghum cytosol, nucleus, plasma membrane 40.58 37.06
KXG36379 Sorghum cytosol 20.29 35.34
EER88274 Sorghum cytosol 38.42 35.22
KXG36384 Sorghum cytosol 18.85 32.83
EER87702 Sorghum nucleus 33.96 32.07
EER97319 Sorghum plastid 29.5 31.06
EER87700 Sorghum cytosol 35.54 30.65
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 26.19 29.5
VIT_14s0081g00350.t01 Wine grape cytosol 22.59 29.4
OQU78058 Sorghum plasma membrane 26.47 29.39
OQU83144 Sorghum cytosol 16.69 28.86
EES18294 Sorghum plasma membrane 28.92 28.76
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 25.61 28.39
KXG27928 Sorghum plasma membrane 26.76 28.01
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 26.19 27.83
OQU83139 Sorghum cytosol 8.78 27.23
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 26.19 26.92
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 22.01 26.56
VIT_05s0124g00670.t01 Wine grape cytosol 21.58 25.91
EER90917 Sorghum cytosol, peroxisome, plasma membrane 20.72 25.9
VIT_05s0165g00060.t01 Wine grape cytosol 9.35 25.59
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 21.87 25.59
VIT_14s0081g00390.t01 Wine grape cytosol 18.7 25.34
VIT_12s0059g00110.t01 Wine grape cytosol 14.1 25.32
Bra023774.1-P Field mustard plasma membrane 22.16 25.25
VIT_12s0059g00130.t01 Wine grape cytosol 13.81 25.2
VIT_12s0059g00150.t01 Wine grape cytosol 13.81 24.81
EER89595 Sorghum cytosol 13.38 24.6
VIT_05s0165g00010.t01 Wine grape nucleus 16.26 24.51
VIT_05s0124g00720.t01 Wine grape cytosol 13.38 24.47
EER90916 Sorghum cytosol 19.42 23.89
VIT_05s0165g00140.t01 Wine grape cytosol 15.97 23.82
Solyc07g061750.2.1 Tomato cytosol 19.86 23.79
PGSC0003DMT400071072 Potato cytosol 12.66 23.78
EER96593 Sorghum plasma membrane 16.55 23.76
VIT_12s0059g00090.t01 Wine grape cytosol 12.23 23.68
VIT_12s0059g00060.t01 Wine grape cytosol 17.41 23.54
VIT_14s0081g00360.t01 Wine grape cytosol 14.1 23.33
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 17.55 23.33
VIT_13s0047g01220.t01 Wine grape plasma membrane 20.72 23.23
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 21.15 23.22
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 18.27 23.09
VIT_12s0028g03960.t01 Wine grape plasma membrane 13.81 23.08
EES07299 Sorghum cytosol, plasma membrane 17.55 23.06
VIT_14s0081g00420.t01 Wine grape cytosol 19.71 23.03
VIT_05s0029g01420.t01 Wine grape cytosol 21.73 23.02
VIT_19s0014g05330.t01 Wine grape extracellular 18.99 22.8
VIT_05s0029g01540.t01 Wine grape plasma membrane 21.73 22.64
OQU83143 Sorghum cytosol 11.37 22.64
VIT_05s0102g00050.t01 Wine grape nucleus 19.57 22.63
VIT_05s0102g00030.t01 Wine grape cytosol 19.14 22.54
VIT_05s0029g01490.t01 Wine grape cytosol 15.4 22.48
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 13.09 22.47
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 22.59 22.46
VIT_12s0059g00050.t01 Wine grape plasma membrane 20.86 22.41
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 16.55 22.37
VIT_12s0028g04020.t01 Wine grape plasma membrane 10.22 22.33
VIT_05s0165g00290.t01 Wine grape cytosol 19.28 22.3
EER95066 Sorghum cytosol 17.84 21.87
VIT_05s0124g00460.t01 Wine grape cytosol 8.49 21.85
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 20.72 21.59
Bra033416.1-P Field mustard cytosol 17.41 21.57
EER97054 Sorghum cytosol 17.41 21.53
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 15.97 21.47
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 18.13 21.47
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 18.85 21.41
EES15259 Sorghum cytosol 17.27 21.35
AT4G03460.1 Thale cress peroxisome 19.28 21.34
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 20.72 21.27
EES03848 Sorghum cytosol 16.98 21.22
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 20.29 21.17
AT4G05040.1 Thale cress cytosol 17.27 20.98
Bra000823.1-P Field mustard plasma membrane 13.38 20.95
VIT_14s0081g00370.t01 Wine grape cytosol 10.22 20.82
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 17.41 20.79
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 18.42 20.78
VIT_12s0028g03990.t01 Wine grape cytosol 17.55 20.57
OQU83151 Sorghum cytosol 4.32 20.55
AT4G03450.1 Thale cress plasma membrane 18.42 19.97
Bra034209.1-P Field mustard cytosol 17.84 19.87
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 20.14 19.86
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 21.87 19.79
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 18.42 19.63
EER95067 Sorghum cytosol, nucleus, plasma membrane 18.85 19.04
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 18.13 18.81
AT4G03480.1 Thale cress mitochondrion 17.7 18.66
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 18.42 17.85
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 21.01 17.74
VIT_12s0028g04010.t01 Wine grape cytosol 11.37 17.63
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 17.27 17.57
AT4G14390.1 Thale cress plasma membrane 17.41 17.44
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 17.7 17.32
AT4G03440.1 Thale cress cytosol 17.84 16.51
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 20.72 16.25
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 20.43 15.2
VIT_12s0059g00120.t01 Wine grape cytosol 16.4 13.82
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1Z5R974InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:OQU80298ProteinID:OQU80298ProteinID:OQU80298.1
PFAM:PF00023PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177
PANTHER:PTHR24177:SF111SMART:SM00248EnsemblPlantsGene:SORBI_3007G107200SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI000B8B9AE7
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:38843790..38847314
Molecular Weight (calculated)
75309.6 Da
IEP (calculated)
8.543
GRAVY (calculated)
-0.033
Length
695 amino acids
Sequence
(BLAST)
001: MAAAAMHPYT RQPYVRPSHT TTMHPRLLMA ARLGDTQRLK NLLDDGRSVS VGAHVVRVEG SSSSSGPSAA TPLTTTACGS SCSLLHVVAA SGDGDEFLES
101: AKVIHDRARH LLGIPDSNGD TPLHLAARAG NARMVSHLIH LAKTTDDDVA GEEGHGGADE SRSSRLVKEL LRGENRRGET VLHDAVRVGS RCMVIRLMEE
201: DPELASFPRE EGRGASPLYL AVVMEEVAIA RSLHDMSHGS LSYAGPNGQN ALHAAVLRGK VMTAMLLGWN EGLTEQGDHD GCTPLHFATS QQPEEGRSLP
301: CRISNKFPWV RLSAADIPLL LLQTNPCSAY CRDAGGAFPI HVAAAVGAHK AVTTLLGMSP DSAGLQDAGG RTFLHVAVEK KRHSVVKHAC RAPSLAWILN
401: MQDKDGNTAL HLAVKAGDTR TFFLLFGNRQ VRMDLANNDG QTCRDLSLID IPPGLSYKWN PKQMIHRALT RARAAHGIRR WDQFEEECIL RPRREDEEKE
501: SEKLNNSTQT LGISSVLIVT VTFGATFALP GGYIADDHAN GGAPTLAGRR AFRVFVVANA LAFICSSLGT VGLMYSGITT VDLPIRQRHF LRSLFFVSSS
601: LTCLVVAFAS GSYTVLSPVA HSTAVAICVI SMVVIVYRSL GRFQRMYALA APLYVRAGIQ PLLRLAKDIF TRMLRLYWPF IVIFTWAACA TNHDA
Best Arabidopsis Sequence Match ( AT4G03500.2 )
(BLAST)
001: MGRPDVHLDR RVAENHQAIP RNNVRSTPSL DLSTLFDETS ETKPMDPKTM AAVRAGKENY LRSNNSYISV APTLVNDRGN TILHLAASSG HVSLVRYIIQ
101: KCPGLLLKSN MMGEVALHLA AEAGHLDVVW NLIDFINDIS CTNLPVAKRI YFAKNKNQDT ALHVALKGKH EVVASYLVSA AKSLSFVANR DGFSPLYLAI
201: EAGHTSLVTT MCHGTNELSS KVGGRSIVHA ALKANRKDIL DALLSKDASL INLRDEGRTS LSFGASIGYY QGFSYLFDKN RDKVYVSDDD GLFPTHMAAK
301: YGHVQILEEI LKHCPEAIEL LDRDGQNILH LAAKYGKLKV IKFILSCCKD KNKKKLINEQ DVNGNTPLHL ATINWHPKVV SMFTWDHRVD LKKRNYIGFT
401: ALDVAEENID SSYIVHQRLT WMALINAGAP KSSTPITENL RSFKKPDGGK YKDRVNTLML VATLVATMTF TAGFTLPGGY NDSFPHLGMA VLAKRTAFQV
501: FLVCDTLAMY SSIITIVALI WAQLGDLSII LKAFNIALPF LGLALTSMSI AFMAGTYVAV SHLPLLGYFV LGIGIIFLLV LLLLLVPYVS PYAHAQPLLR
601: HIFYYPYFLK LLAAGDNKNI VDVYTASDE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.