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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • mitochondrion 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0435100-00 Rice plastid 19.57 69.19
Os11t0435300-00 Rice cytosol, peroxisome 58.1 64.3
Os11t0434400-00 Rice extracellular 38.84 62.56
TraesCS4D01G326300.1 Wheat cytosol 59.33 61.59
TraesCS3B01G046200.1 Wheat cytosol, peroxisome, vacuole 59.63 61.51
TraesCS3D01G042100.1 Wheat cytosol, peroxisome, plasma membrane 59.63 61.42
Os11t0434850-00 Rice cytosol 37.16 60.15
KXG27928 Sorghum plasma membrane 44.19 43.52
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 42.81 41.42
EER96593 Sorghum plasma membrane 27.83 37.6
GSMUA_Achr9P02700_001 Banana cytosol 19.57 33.25
GSMUA_Achr9P02720_001 Banana cytosol 19.72 33.16
KXG36379 Sorghum cytosol 19.88 32.58
GSMUA_Achr9P02740_001 Banana cytosol 27.37 30.49
GSMUA_Achr7P12630_001 Banana cytosol 27.98 28.11
KXG36384 Sorghum cytosol 17.13 28.07
GSMUA_Achr9P02690_001 Banana plasma membrane 24.31 27.6
PGSC0003DMT400071072 Potato cytosol 15.44 27.3
VIT_14s0081g00350.t01 Wine grape cytosol 22.17 27.15
OQU83144 Sorghum cytosol 16.36 26.62
VIT_12s0059g00130.t01 Wine grape cytosol 15.44 26.51
OQU80298 Sorghum mitochondrion, plastid 27.83 26.19
VIT_05s0165g00060.t01 Wine grape cytosol 9.94 25.59
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 24.31 25.36
OQU89270 Sorghum cytosol 21.71 25.27
VIT_12s0059g00150.t01 Wine grape cytosol 14.83 25.06
VIT_12s0059g00110.t01 Wine grape cytosol 14.68 24.81
VIT_12s0028g03960.t01 Wine grape plasma membrane 15.75 24.76
VIT_05s0124g00670.t01 Wine grape cytosol 21.87 24.7
OQU84849 Sorghum plasma membrane 24.01 24.65
OQU78058 Sorghum plasma membrane 23.55 24.6
VIT_12s0028g04020.t01 Wine grape plasma membrane 11.93 24.53
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 21.56 24.48
VIT_12s0059g00090.t01 Wine grape cytosol 13.3 24.23
VIT_12s0059g00060.t01 Wine grape cytosol 18.96 24.12
OQU83139 Sorghum cytosol 8.26 24.11
VIT_05s0124g00720.t01 Wine grape cytosol 13.91 23.95
VIT_05s0165g00010.t01 Wine grape nucleus 16.82 23.86
VIT_19s0014g05330.t01 Wine grape extracellular 21.1 23.83
EER97319 Sorghum plastid 24.01 23.79
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 24.62 23.78
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 22.94 23.7
EES18294 Sorghum plasma membrane 25.23 23.61
VIT_05s0165g00140.t01 Wine grape cytosol 16.82 23.61
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 21.25 23.4
VIT_12s0059g00050.t01 Wine grape plasma membrane 23.09 23.34
VIT_05s0102g00050.t01 Wine grape nucleus 21.41 23.29
OQU83151 Sorghum cytosol 5.2 23.29
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 21.87 23.21
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 18.2 23.15
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 18.5 23.14
VIT_05s0165g00290.t01 Wine grape cytosol 21.25 23.13
VIT_14s0081g00420.t01 Wine grape cytosol 20.95 23.03
Bra023774.1-P Field mustard plasma membrane 21.41 22.95
EER90917 Sorghum cytosol, peroxisome, plasma membrane 19.42 22.84
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 20.49 22.83
VIT_14s0081g00390.t01 Wine grape cytosol 17.89 22.81
VIT_05s0102g00030.t01 Wine grape cytosol 20.49 22.71
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 20.18 22.68
Bra033416.1-P Field mustard cytosol 19.42 22.64
VIT_12s0028g03990.t01 Wine grape cytosol 20.49 22.6
Bra000823.1-P Field mustard plasma membrane 15.29 22.52
EER89595 Sorghum cytosol 13.0 22.49
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 20.95 22.39
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 22.63 22.22
Solyc07g061750.2.1 Tomato cytosol 19.57 22.07
VIT_05s0029g01490.t01 Wine grape cytosol 16.05 22.06
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 18.5 22.0
OQU84108 Sorghum cytosol, nucleus, plasma membrane 25.38 21.81
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 17.13 21.66
Bra034209.1-P Field mustard cytosol 20.49 21.47
VIT_13s0047g01220.t01 Wine grape plasma membrane 20.34 21.45
EER90916 Sorghum cytosol 18.5 21.42
EER87702 Sorghum nucleus 24.01 21.33
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 20.03 21.23
VIT_05s0124g00460.t01 Wine grape cytosol 8.72 21.11
EER88274 Sorghum cytosol 24.46 21.11
AT4G05040.1 Thale cress cytosol 18.35 20.98
AT4G03450.1 Thale cress plasma membrane 20.49 20.9
AT4G03460.1 Thale cress peroxisome 20.03 20.86
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 21.25 20.84
VIT_05s0029g01420.t01 Wine grape cytosol 20.8 20.73
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 20.64 20.71
EES15259 Sorghum cytosol 17.74 20.64
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 21.87 20.46
VIT_05s0029g01540.t01 Wine grape plasma membrane 20.8 20.39
OQU83143 Sorghum cytosol 10.86 20.34
EES07299 Sorghum cytosol, plasma membrane 16.21 20.04
VIT_14s0081g00360.t01 Wine grape cytosol 12.84 20.0
VIT_14s0081g00370.t01 Wine grape cytosol 10.4 19.94
EER95066 Sorghum cytosol 17.28 19.93
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 12.23 19.75
EER87700 Sorghum cytosol 24.16 19.6
AT4G03480.1 Thale cress mitochondrion 19.72 19.58
EER97054 Sorghum cytosol 16.82 19.57
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 21.1 19.25
VIT_12s0028g04010.t01 Wine grape cytosol 13.15 19.2
AT4G03440.1 Thale cress cytosol 22.02 19.17
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 19.57 19.1
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 20.34 18.73
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 19.42 18.59
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 20.03 18.58
EES03848 Sorghum cytosol 15.75 18.53
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 23.09 18.35
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 21.41 18.23
AT4G14390.1 Thale cress plasma membrane 18.96 17.87
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 22.32 16.48
EER95067 Sorghum cytosol, nucleus, plasma membrane 16.36 15.55
VIT_12s0059g00120.t01 Wine grape cytosol 16.82 13.33
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 18.2 12.74
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1B6PRS5InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:KXG28374ProteinID:KXG28374
ProteinID:KXG28374.1PFAM:PF12796PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24177PANTHER:PTHR24177:SF116SMART:SM00248EnsemblPlantsGene:SORBI_3005G115300SUPFAM:SSF48403TMHMM:TMhelix
UniParc:UPI00081AC6CESEG:seg::::
Description
hypothetical protein
Coordinates
chr5:-:50559426..50562575
Molecular Weight (calculated)
70736.4 Da
IEP (calculated)
9.213
GRAVY (calculated)
0.097
Length
654 amino acids
Sequence
(BLAST)
001: MESAQGQAIS KDELPDCMFM CSELYIAAFE GRTEEVLIGL QTGGVHTATA ARNGRRRPSP GDATPTVIIS GTQHGPCCST REVTADRSTL LHIAAGQGHR
101: DLVTEVGLRD GALLFAANSS LDTPLHCAAR SGHAGAIEAI VRLARRDVDD ADRRLREELL GRRNRGGDTA LHVAARHGHG EAVEALMKLA PELAAGVNGA
201: AVSPLYLAVM SRSVRAVEAI LGYRDASAAG PMSQNALHAA VFQSSEMVSL LLRWKPRLAT DLDGQKSSPL HFASSDGDCA IIKEILTYAP PSTAYLQDRE
301: GHSALHAAAL MGNGPAVKLL LQFYPASADI RDNQGRSFLH AAALRGHSSI VSYVIKNRML ENLLNVQDQE GNTALHLAVQ AGEYRVVSKL LSSGKMQVHI
401: MNNEGCTPSD QIENSTSFYS MVRLVVMLNV YQAQFRPQRQ DHVEKWAGQD LVKWRLATSK NLAIVSTLVA TVAFSAAFNV PGSYGSDGKA TLNGNRMYNA
501: FLVLDTIAVT TAVVATILLV YGRASSRSHH SWLDFIISMH FLWLSLLSMM LGFFAAIAAT SDKNSTLIAL VRLIYSGLYV LTLLLTILGS PGTLRGVLRL
601: LFGRKQHLKR RINRQYPFVV IYAFNMLLFV VISNVAIAAV ETIGSVSTSS RNHV
Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)
001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.