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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plastid 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013327_P001 Maize cytosol 87.95 86.24
EER90916 Sorghum cytosol 70.5 69.38
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 45.68 62.72
TraesCS3D01G345200.1 Wheat cytosol, peroxisome, plasma membrane 64.93 62.56
TraesCS3A01G351100.1 Wheat cytosol 64.75 62.39
HORVU3Hr1G087640.1 Barley cytosol 64.57 62.22
HORVU7Hr1G096820.1 Barley cytosol 61.87 61.21
TraesCS7B01G317700.1 Wheat cytosol, peroxisome, plasma membrane 62.05 60.53
Os07t0193200-00 Rice plasma membrane 60.97 60.32
TraesCS7D01G410500.1 Wheat cytosol 61.51 60.0
TraesCS6B01G437600.1 Wheat cytosol 60.07 59.12
TraesCS7A01G417600.1 Wheat cytosol, peroxisome, plasma membrane 62.05 58.87
TraesCS6B01G013100.1 Wheat cytosol, mitochondrion, plasma membrane 58.27 57.04
TraesCS6B01G013000.1 Wheat cytosol, peroxisome, plasma membrane 53.06 51.57
TraesCS6D01G011400.1 Wheat peroxisome 49.1 50.09
OQU83144 Sorghum cytosol 23.2 32.09
OQU83139 Sorghum cytosol 12.41 30.8
VIT_14s0081g00350.t01 Wine grape cytosol 29.32 30.52
VIT_05s0124g00670.t01 Wine grape cytosol 31.3 30.05
PGSC0003DMT400071072 Potato cytosol 19.6 29.46
VIT_05s0165g00140.t01 Wine grape cytosol 23.74 28.33
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 29.32 28.3
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 26.08 28.21
VIT_05s0165g00010.t01 Wine grape nucleus 23.38 28.2
VIT_05s0124g00720.t01 Wine grape cytosol 19.24 28.16
VIT_12s0059g00130.t01 Wine grape cytosol 19.06 27.82
VIT_13s0047g01220.t01 Wine grape plasma membrane 30.76 27.58
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 25.9 27.53
EER89595 Sorghum cytosol 18.7 27.51
VIT_05s0102g00030.t01 Wine grape cytosol 29.14 27.46
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 30.94 27.17
VIT_12s0059g00090.t01 Wine grape cytosol 17.45 27.02
VIT_05s0102g00050.t01 Wine grape nucleus 29.14 26.96
VIT_12s0059g00110.t01 Wine grape cytosol 18.7 26.87
VIT_12s0059g00060.t01 Wine grape cytosol 24.82 26.85
VIT_05s0165g00290.t01 Wine grape cytosol 28.96 26.79
VIT_12s0059g00150.t01 Wine grape cytosol 18.53 26.61
Bra023774.1-P Field mustard plasma membrane 29.14 26.56
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 27.88 26.41
VIT_12s0028g04020.t01 Wine grape plasma membrane 14.93 26.1
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 27.88 26.09
VIT_05s0165g00060.t01 Wine grape cytosol 11.87 25.98
VIT_05s0124g00460.t01 Wine grape cytosol 12.59 25.93
KXG36379 Sorghum cytosol 18.53 25.81
Solyc07g061750.2.1 Tomato cytosol 26.8 25.69
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 26.8 25.6
VIT_12s0028g03960.t01 Wine grape plasma membrane 19.06 25.48
Bra034209.1-P Field mustard cytosol 28.42 25.32
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 30.04 25.08
KXG36384 Sorghum cytosol 17.99 25.06
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 24.64 24.91
VIT_12s0059g00050.t01 Wine grape plasma membrane 28.78 24.73
VIT_05s0029g01420.t01 Wine grape cytosol 29.14 24.7
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 27.34 24.68
Bra033416.1-P Field mustard cytosol 24.82 24.6
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 29.5 24.59
VIT_05s0029g01490.t01 Wine grape cytosol 20.86 24.37
VIT_14s0081g00390.t01 Wine grape cytosol 22.3 24.17
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 26.44 24.02
VIT_19s0014g05330.t01 Wine grape extracellular 25.0 24.01
VIT_12s0028g03990.t01 Wine grape cytosol 25.54 23.95
VIT_05s0029g01540.t01 Wine grape plasma membrane 28.6 23.84
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 22.12 23.79
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 28.96 23.78
AT4G03460.1 Thale cress peroxisome 26.44 23.41
OQU83151 Sorghum cytosol 6.12 23.29
VIT_14s0081g00420.t01 Wine grape cytosol 24.82 23.19
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 27.16 23.16
VIT_14s0081g00360.t01 Wine grape cytosol 17.09 22.62
EER97319 Sorghum plastid 26.8 22.58
AT4G05040.1 Thale cress cytosol 22.84 22.2
KXG27928 Sorghum plasma membrane 26.44 22.14
OQU83143 Sorghum cytosol 13.85 22.06
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 27.7 22.03
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 24.64 21.85
Bra000823.1-P Field mustard plasma membrane 17.27 21.62
EES18294 Sorghum plasma membrane 26.98 21.46
OQU78058 Sorghum plasma membrane 24.1 21.41
OQU89270 Sorghum cytosol 21.58 21.35
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 27.16 21.27
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 29.14 21.09
OQU84849 Sorghum plasma membrane 24.1 21.04
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 25.54 21.01
OQU80298 Sorghum mitochondrion, plastid 25.9 20.72
EER95066 Sorghum cytosol 21.04 20.63
AT4G03450.1 Thale cress plasma membrane 23.38 20.28
AT4G14390.1 Thale cress plasma membrane 25.18 20.17
VIT_12s0028g04010.t01 Wine grape cytosol 16.19 20.09
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 25.36 20.0
VIT_14s0081g00370.t01 Wine grape cytosol 12.23 19.94
EES03848 Sorghum cytosol 19.78 19.78
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 23.56 19.55
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 22.84 19.42
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 28.6 19.32
EES07299 Sorghum cytosol, plasma membrane 18.35 19.28
EER97054 Sorghum cytosol 19.42 19.22
EES15259 Sorghum cytosol 19.24 19.04
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 24.28 18.83
AT4G03480.1 Thale cress mitochondrion 22.3 18.82
EER96593 Sorghum plasma membrane 16.37 18.8
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 29.14 18.28
OQU84108 Sorghum cytosol, nucleus, plasma membrane 25.0 18.27
EER87702 Sorghum nucleus 23.92 18.07
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 22.12 18.01
AT4G03440.1 Thale cress cytosol 24.28 17.98
EER88274 Sorghum cytosol 24.28 17.81
EER95067 Sorghum cytosol, nucleus, plasma membrane 21.04 17.01
EER87700 Sorghum cytosol 24.64 17.0
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 17.09 15.4
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 25.18 14.99
VIT_12s0059g00120.t01 Wine grape cytosol 21.76 14.67
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1EntrezGene:8059935InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
UniProt:C5WLV5EnsemblPlants:EER90917ProteinID:EER90917ProteinID:EER90917.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770PFAM:PF12796
PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177PANTHER:PTHR24177:SF84
SMART:SM00248EnsemblPlantsGene:SORBI_3001G099600SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0001A823EARefSeq:XP_002463919.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:7619705..7621923
Molecular Weight (calculated)
61765.0 Da
IEP (calculated)
8.623
GRAVY (calculated)
-0.078
Length
556 amino acids
Sequence
(BLAST)
001: MDSERRMNPA LYKAATQGKM SSLKQLVDPE DPSVLSATTP QLNTALHLAA LHGHAEFAGE VLDMNEELLV AQNNDGDTPL HLAAKAGKLE VARLLVNRAL
101: AWPQDKKSPL IMTNKAGDTA LHEAVKYRRG AVAVVLLDAD PNRGHDLNER MESPLDMAAR EGLVQVVQKI VNSPWVGQEF LPGISLSGTA LHQAVLGTHH
201: RIVEILLDKR PDLIDLTDSD GNNALHYAAQ KDHQRAVEML LKKRTELAYK RNNKSMSPLH VAAQYGSTDT IKALLRHCPD VAEMADSYGR NAFHASVISG
301: KANALRCLLR RVRPAELLNR VDINGDTPLH LAAKMSRVHS ALMLLNDSRV DPCVRDHDGQ TARSLVERKL HTGEMDAYEM YLWKQLRYQE SKRCRKQQLP
401: PLATYPSRRG NDKYFERIVE TYILVATLIA TVTFAATFTM PGGYNQTTGI ALQGHHVAFQ IFVVSNTIAM CSSIVVVFCF IWAWQDPVRF KVDQLLWGHR
501: LTVIACLGML VSLMTAVYIT VEPVSRWPAY VVIAIGTSTP AVVFLMLGRE VIFVPL
Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)
001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.