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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os09t0334900-00 Rice cytosol, peroxisome, plasma membrane 48.76 43.3
TraesCS7D01G034400.1 Wheat cytosol, peroxisome, plasma membrane 48.14 40.88
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 37.6 27.83
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 34.71 24.85
OQU83139 Sorghum cytosol 10.74 23.21
KXG27928 Sorghum plasma membrane 31.82 23.19
VIT_05s0124g00460.t01 Wine grape cytosol 12.19 21.85
VIT_05s0165g00060.t01 Wine grape cytosol 11.16 21.26
GSMUA_Achr9P02700_001 Banana cytosol 15.29 19.22
OQU83144 Sorghum cytosol 15.7 18.91
VIT_05s0165g00140.t01 Wine grape cytosol 18.18 18.88
GSMUA_Achr9P02720_001 Banana cytosol 14.88 18.51
VIT_14s0081g00370.t01 Wine grape cytosol 13.02 18.48
GSMUA_Achr7P12630_001 Banana cytosol 24.79 18.43
GSMUA_Achr9P02690_001 Banana plasma membrane 21.28 17.88
GSMUA_Achr9P02740_001 Banana cytosol 21.28 17.55
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 20.45 17.19
EER97319 Sorghum plastid 23.35 17.12
OQU89270 Sorghum cytosol 19.83 17.08
VIT_14s0081g00350.t01 Wine grape cytosol 18.59 16.85
KXG36379 Sorghum cytosol 13.84 16.79
OQU80298 Sorghum mitochondrion, plastid 23.76 16.55
EER90917 Sorghum cytosol, peroxisome, plasma membrane 18.8 16.37
VIT_05s0124g00720.t01 Wine grape cytosol 12.81 16.32
PGSC0003DMT400071072 Potato cytosol 12.4 16.22
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 20.25 16.01
VIT_05s0165g00290.t01 Wine grape cytosol 19.83 15.97
VIT_05s0102g00050.t01 Wine grape nucleus 19.63 15.81
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 21.28 15.8
VIT_05s0029g01490.t01 Wine grape cytosol 15.5 15.76
EES18294 Sorghum plasma membrane 22.73 15.74
VIT_19s0014g05330.t01 Wine grape extracellular 18.8 15.72
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 18.8 15.64
VIT_05s0124g00670.t01 Wine grape cytosol 18.59 15.54
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 19.01 15.49
VIT_13s0047g01220.t01 Wine grape plasma membrane 19.83 15.48
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 20.25 15.48
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 20.04 15.47
AT4G03460.1 Thale cress peroxisome 20.04 15.45
VIT_05s0029g01420.t01 Wine grape cytosol 20.87 15.4
Solyc07g061750.2.1 Tomato cytosol 18.39 15.34
Bra023774.1-P Field mustard plasma membrane 19.21 15.25
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 16.12 15.18
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 19.21 15.1
VIT_05s0102g00030.t01 Wine grape cytosol 18.39 15.08
EER90916 Sorghum cytosol 17.56 15.04
OQU84849 Sorghum plasma membrane 19.63 14.91
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 20.45 14.86
OQU78058 Sorghum plasma membrane 19.21 14.86
KXG36384 Sorghum cytosol 12.19 14.79
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 17.77 14.65
VIT_12s0059g00060.t01 Wine grape cytosol 15.5 14.59
OQU84108 Sorghum cytosol, nucleus, plasma membrane 22.93 14.59
VIT_05s0029g01540.t01 Wine grape plasma membrane 20.04 14.54
VIT_12s0028g04010.t01 Wine grape cytosol 13.43 14.51
VIT_12s0028g03990.t01 Wine grape cytosol 17.77 14.5
VIT_12s0059g00050.t01 Wine grape plasma membrane 19.21 14.37
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 15.08 13.96
VIT_05s0165g00010.t01 Wine grape nucleus 13.22 13.88
EER89595 Sorghum cytosol 10.74 13.76
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 18.8 13.64
VIT_14s0081g00420.t01 Wine grape cytosol 16.74 13.61
EER88274 Sorghum cytosol 21.07 13.46
EER87702 Sorghum nucleus 20.45 13.45
AT4G03450.1 Thale cress plasma membrane 17.77 13.42
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 19.83 13.39
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 18.8 13.32
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 15.08 13.27
EER87700 Sorghum cytosol 21.9 13.15
Bra034209.1-P Field mustard cytosol 16.94 13.14
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 18.18 13.13
Bra033416.1-P Field mustard cytosol 15.08 13.01
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 20.45 12.89
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 17.98 12.85
VIT_14s0081g00390.t01 Wine grape cytosol 13.43 12.67
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 10.54 12.59
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 18.18 12.59
AT4G05040.1 Thale cress cytosol 14.88 12.59
EER95066 Sorghum cytosol 14.67 12.52
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 18.18 12.48
AT4G03480.1 Thale cress mitochondrion 16.94 12.44
OQU83143 Sorghum cytosol 8.88 12.32
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 15.29 11.99
AT4G03440.1 Thale cress cytosol 18.59 11.98
AT4G14390.1 Thale cress plasma membrane 16.94 11.82
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 12.4 11.61
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 19.01 11.18
EER97054 Sorghum cytosol 12.81 11.03
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 16.12 10.99
EES07299 Sorghum cytosol, plasma membrane 11.98 10.96
VIT_12s0028g04020.t01 Wine grape plasma membrane 7.02 10.69
VIT_12s0059g00110.t01 Wine grape cytosol 8.47 10.59
VIT_12s0059g00150.t01 Wine grape cytosol 8.47 10.59
EES03848 Sorghum cytosol 11.98 10.43
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 18.8 10.27
EES15259 Sorghum cytosol 11.78 10.14
Bra000823.1-P Field mustard plasma membrane 9.3 10.14
VIT_12s0059g00090.t01 Wine grape cytosol 7.02 9.47
VIT_12s0059g00130.t01 Wine grape cytosol 7.44 9.45
VIT_12s0059g00120.t01 Wine grape cytosol 15.91 9.33
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 17.36 8.99
EER95067 Sorghum cytosol, nucleus, plasma membrane 12.4 8.72
VIT_12s0028g03960.t01 Wine grape plasma membrane 7.23 8.41
VIT_14s0081g00360.t01 Wine grape cytosol 5.99 6.9
OQU83151 Sorghum cytosol 0.41 1.37
Protein Annotations
Gene3D:1.25.40.20MapMan:35.2InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfUniProt:C5XAG6
EnsemblPlants:EER96593ProteinID:EER96593ProteinID:EER96593.1GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770PFAM:PF12796PFAM:PF13962
InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177PANTHER:PTHR24177:SF72SMART:SM00248
EnsemblPlantsGene:SORBI_3002G174700SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0001A83967RefSeq:XP_002460072.1RefSeq:XP_002460073.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:+:55267214..55268965
Molecular Weight (calculated)
52050.7 Da
IEP (calculated)
9.480
GRAVY (calculated)
0.406
Length
484 amino acids
Sequence
(BLAST)
001: MEQILDVEFA ERREEALRKA KDLGDKNLQA ALCCARTLPD DALRLPLLQL PDDPEYFHGE AAQIVERKFM CSELYRAALS GSAQQVQDLV APSVPTTGTT
101: HQGGCSLDEV TAGRNTVLHV AAGRGLVALV QQLFVFVGHE AAAALLPYVN SRSETALHRA ARAGRPKMVA LLIRLAQEHG PGAAVLLGRK NSAGDTALHV
201: AARHGREAVV QVLMVAAPAL SSTVNDAGLS PLYLAVMSRS VDAVKALVQW RHASASGYKG QNALHAAVLH SADGITPWQS KAIKEWHEKT SKNLGIVAVL
301: IATVALSAMF NVPGGYDSGG AANLRSKQVT YNAFLVLDTV AVAASVISTM LLTYGRGAAR SSAAWICLAL IFLWVALMSM VLAFMAAVVS GLDSTTTKGI
401: IWSIFALPFA FLVALSFVWA VPAPTFTSLC LVLRALTGED RRRMRRHIGR RFPLVGFYLL VMYLFWFLNA VAFCLTVYVI VTTI
Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)
001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.