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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • nucleus 1
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031706_P001 Maize cytosol 95.37 95.54
HORVU7Hr1G056430.1 Barley cytosol 85.94 87.66
Os08t0542700-01 Rice cytosol 86.83 87.61
TraesCS7B01G166600.1 Wheat cytosol 85.59 87.45
TraesCS7D01G268900.1 Wheat cytosol 85.23 87.09
TraesCS7A01G265800.1 Wheat cytosol 85.05 86.91
EER97054 Sorghum cytosol 82.03 82.03
GSMUA_Achr11P... Banana cytosol, mitochondrion, peroxisome, plasma membrane 71.53 69.67
KRH27553 Soybean cytosol, peroxisome, plasma membrane 28.65 63.39
GSMUA_Achr11P... Banana cytosol, mitochondrion, plasma membrane, plastid 72.6 62.77
KRG97307 Soybean cytosol 62.1 62.54
GSMUA_Achr7P23730_001 Banana cytosol 35.23 62.46
KRH69034 Soybean cytosol 62.28 61.84
PGSC0003DMT400064924 Potato cytosol 59.61 60.8
VIT_05s0094g01320.t01 Wine grape cytosol 62.99 60.62
CDY58363 Canola cytosol 59.96 60.61
Solyc08g014570.2.1 Tomato cytosol, peroxisome, plasma membrane 59.79 59.79
Solyc12g019060.1.1 Tomato cytosol 60.5 59.65
PGSC0003DMT400052568 Potato cytosol 60.5 59.54
PGSC0003DMT400075256 Potato cytosol 58.36 58.26
Solyc12g096670.1.1 Tomato cytosol 59.25 58.01
CDY15549 Canola cytosol 57.47 57.89
KRH64845 Soybean cytosol 53.74 54.61
CDY19113 Canola cytosol 61.21 54.52
Bra021752.1-P Field mustard cytosol 61.92 53.46
Bra030618.1-P Field mustard cytosol 58.19 53.43
CDY42071 Canola cytosol, nucleus, plasma membrane, plastid 58.54 52.89
CDY34515 Canola cytosol, nucleus, plasma membrane, plastid 58.54 52.47
AT1G05640.1 Thale cress cytosol 58.36 52.31
AT2G31820.1 Thale cress cytosol, nucleus, plasma membrane 61.39 52.11
Bra005639.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 56.58 51.54
CDX86566 Canola cytosol 50.89 49.57
EER95066 Sorghum cytosol 49.29 48.85
EES07299 Sorghum cytosol, plasma membrane 41.46 44.05
EES03848 Sorghum cytosol 40.21 40.65
EER95067 Sorghum cytosol, nucleus, plasma membrane 40.75 33.28
OQU83151 Sorghum cytosol 6.76 26.03
OQU83144 Sorghum cytosol 16.73 23.38
KXG36379 Sorghum cytosol 15.66 22.06
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 23.13 21.89
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 20.64 21.09
EER90917 Sorghum cytosol, peroxisome, plasma membrane 19.04 19.24
EER90916 Sorghum cytosol 19.22 19.11
EER89595 Sorghum cytosol 12.63 18.78
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 22.06 18.34
OQU89270 Sorghum cytosol 18.15 18.15
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 12.99 18.02
EER97319 Sorghum plastid 21.0 17.88
KXG27928 Sorghum plasma membrane 21.0 17.77
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 20.64 17.74
OQU80298 Sorghum mitochondrion, plastid 21.35 17.27
OQU83143 Sorghum cytosol 10.68 17.19
OQU84108 Sorghum cytosol, nucleus, plasma membrane 22.06 16.29
KXG36384 Sorghum cytosol 11.57 16.29
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 17.79 16.21
OQU84849 Sorghum plasma membrane 18.33 16.17
EES18294 Sorghum plasma membrane 19.75 15.88
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 17.62 15.79
OQU78058 Sorghum plasma membrane 17.08 15.34
EER88274 Sorghum cytosol 20.46 15.17
EER87702 Sorghum nucleus 18.15 13.86
EER87700 Sorghum cytosol 19.57 13.65
OQU83139 Sorghum cytosol 5.34 13.39
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 21.17 12.74
EER96593 Sorghum plasma membrane 10.14 11.78
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1EntrezGene:8060561InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
UniProt:C5YH88ncoils:CoilEnsemblPlants:EES15259ProteinID:EES15259ProteinID:EES15259.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR002110
InterPro:IPR020683InterPro:IPR036770PFAM:PF12796PFAM:PF13857PFAM:PF13962InterPro:PGG_dom
PFscan:PS50088PFscan:PS50297PANTHER:PTHR24186PANTHER:PTHR24186:SF5SMART:SM00248EnsemblPlantsGene:SORBI_3007G183800
SUPFAM:SSF48403unigene:Sbi.8718TMHMM:TMhelixUniParc:UPI0001A87EE7RefSeq:XP_002445764.1SEG:seg
Description
hypothetical protein
Coordinates
chr7:-:61696115..61700089
Molecular Weight (calculated)
61573.1 Da
IEP (calculated)
10.198
GRAVY (calculated)
-0.022
Length
562 amino acids
Sequence
(BLAST)
001: MERQSSIRLG ALEKLKSFRG MEKQKSFRGI MSLERRSRDS PGKRGDTPLH LAARSGSVAH AQRILAELDR ALVAEMAAKQ NQDGETPLYV AAEKGHAEVV
101: REILKVSDVQ TAGIKASNSF DAFHIAAKQG HLEVLKEMLQ ALPALAMTTN SVNATALDTA AILGHVDIVN LLLETDASLA RIARNNGKTV LHSAARMGHV
201: EVVRSLLNKD PGIGLRTDKK GQTALHMASK GQNAEIVVEL LKPDVSVIHI EDNKGNRPLH VATRKGNIII VQTLLSVEGI DVNAVNRSGE TAFAIAEKMN
301: NEELVNILKE AGGETAKQQV HPPNSAKQLK QTVSDIRHDV QSQIKQTRQT KMQVNQIKKR LEKLHIGGLN NAINSNTVVA VLIATVAFAA IFTVPGNFVE
401: DLTQAPPGMS LGQAYVASNP AFIIFLVFDA LALFISLAVV VVQTSLIVVE RRAKKRMVFV MNKLMWLACL FISVAFIALT YVVVGRDDWW LAWCTMAIGT
501: VIMLTTLGSM CYCIIAHRLE EKNTRKIRKK ASASQSRGSW SRSVDSDEEI LNSEYKTKMY AL
Best Arabidopsis Sequence Match ( AT2G31820.1 )
(BLAST)
001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.