Factsheet for GSMUA_Achr11P11220_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	79.85	89.95
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	31.85	88.46
TraesCS7D01G268900.1	Wheat	cytosol	62.77	74.18
GSMUA_Achr7P23730_001	Banana	cytosol	36.15	74.13
HORVU7Hr1G056430.1	Barley	cytosol	62.62	73.87
TraesCS7A01G265800.1	Wheat	cytosol	62.46	73.82
TraesCS7B01G166600.1	Wheat	cytosol	62.46	73.82
EER97054	Sorghum	cytosol	62.77	72.6
EES15259	Sorghum	cytosol	62.77	72.6
Zm00001d006147_P002	Maize	cytosol	62.62	72.42
Zm00001d006142_P002	Maize	cytosol	62.62	72.42
Os09t0518500-01	Rice	cytosol	62.31	72.06
Zm00001d021169_P002	Maize	cytosol	63.23	71.73
Zm00001d031706_P001	Maize	cytosol	61.85	71.66
Os08t0542700-01	Rice	cytosol	61.23	71.45
HORVU5Hr1G079730.3	Barley	cytosol	61.38	70.62
TraesCS5D01G312200.1	Wheat	cytosol	61.23	70.44
TraesCS5B01G305700.1	Wheat	cytosol	60.92	70.09
TraesCS5A01G305200.1	Wheat	cytosol	60.77	69.91
KRG97307	Soybean	cytosol	58.0	67.56
VIT_05s0094g01320.t01	Wine grape	cytosol	60.31	67.12
KRH69034	Soybean	cytosol	57.85	66.43
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	25.38	64.96
PGSC0003DMT400064924	Potato	cytosol	54.0	63.7
Solyc12g019060.1.1	Tomato	cytosol	55.54	63.33
PGSC0003DMT400075256	Potato	cytosol	54.77	63.23
PGSC0003DMT400052568	Potato	cytosol	55.54	63.22
CDY58363	Canola	cytosol	54.0	63.13
Solyc08g014570.2.1	Tomato	cytosol, peroxisome, plasma membrane	54.46	62.99
Solyc12g096670.1.1	Tomato	cytosol	55.38	62.72
CDY15549	Canola	cytosol	52.46	61.11
KRH64845	Soybean	cytosol	49.38	58.05
CDY19113	Canola	cytosol	56.0	57.69
GSMUA_Achr8P02120_001	Banana	cytosol	47.69	57.62
Bra030618.1-P	Field mustard	cytosol	53.85	57.19
Bra021752.1-P	Field mustard	cytosol	56.31	56.22
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	53.38	55.79
AT1G05640.1	Thale cress	cytosol	53.54	55.5
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	53.38	55.34
AT2G31820.1	Thale cress	cytosol, nucleus, plasma membrane	56.31	55.29
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	52.0	54.78
CDX86566	Canola	cytosol	46.62	52.51
GSMUA_Achr6P33230_001	Banana	cytosol	46.46	50.93
GSMUA_Achr11P...	Banana	cytosol	34.46	45.62
GSMUA_Achr9P04170_001	Banana	cytosol	35.54	45.29
GSMUA_Achr9P04150_001	Banana	plasma membrane	45.85	45.29
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	35.38	44.32
GSMUA_Achr6P34410_001	Banana	cytosol	34.62	44.12
GSMUA_Achr5P07190_001	Banana	cytosol	35.54	43.92
GSMUA_Achr6P33220_001	Banana	cytosol	36.62	43.51
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	36.15	42.11
GSMUA_Achr9P03090_001	Banana	cytosol	28.0	21.74
GSMUA_Achr9P02700_001	Banana	cytosol	12.62	21.3
GSMUA_Achr9P02720_001	Banana	cytosol	12.46	20.82
GSMUA_Achr9P02740_001	Banana	cytosol	18.77	20.78
GSMUA_Achr9P02690_001	Banana	plasma membrane	17.23	19.44
GSMUA_Achr7P12630_001	Banana	cytosol	18.46	18.43

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G11220_001
EnsemblPlants:GSMUA_Achr11P11220_001	EnsemblPlants:GSMUA_Achr11T11220_001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0RRA2
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186
PANTHER:PTHR24186:SF8	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI00029521B5	SEG:seg

Description

Putative Ankyrin repeat-containing protein At5g02620 [Source:GMGC_GENE;Acc:GSMUA_Achr11G11220_001]

Coordinates

chr11:+:8921445..8926069

Molecular Weight (calculated)

72502.7 Da

IEP (calculated)

10.202

GRAVY (calculated)

-0.078

Length

650 amino acids

Sequence
(BLAST)

001: MIDGQASRCF FSCFRLCSGS TKVKRRRVKR KRRILWPQFF VCDVLGCEIE EGGWGGARKT LFCRILLALE MEKQSSLRIG ALEKLQSFRL GVMEKQKSFR
101: MDKQRSFRLG DRQQSFKERK NKESPGKRGD LELHLAARAG NAVRVHKILS ECSETQLKDL LFKQNQDGET ALYIAAEKGY VEAVREILKV SDIQSAGIKA
201: NNNYDSFHIA AKQGHLEVLK ELFHSFPALA MTTNSLNSTA LDTAATQGHV DVVNLLLETD ASLAKIARNN GKTVLHSAAR MGHVNVVKSL LDKDPRIGLR
301: TDKKGQTAFH MAVKGQNVEM VMELLKPDPS IINLEDNKGN KPLHIATRKG NPKASYYILK FNLIVQALIS VEGIDINAVN RAGETALSIA EKCENEEIAA
401: ILREFGAVVA KEPANTMTAA KQLKQTVSDI KHDVQSQLRQ THQTEMKVQK IKKRLQKLHL GGLNNAINSN TVVAVLIATV AFAAIFQLPG QFVPDAEDGF
501: TLGQAYIAKN AAFIIFLVFD SLALFISLAV VVVQTSLIVV EQKAKRRMVF VMNKLMWLAC LFISVAFISL TYIVVGHHDL WLAWSTMAIG ATIMLTTLGS
601: MCYCIIVHRI EEKNMRNIRR NSGSRSRSWS ISVGSDSEIL NSEYKKMYAL

Best Arabidopsis Sequence Match ( AT2G31820.1 )
(BLAST)

001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.