Factsheet for GSMUA_Achr5P05930_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017959_P001	Maize	plasma membrane	73.8	72.81
Os02t0735700-01	Rice	plasma membrane	73.6	72.62
EES07299	Sorghum	cytosol, plasma membrane	73.8	72.4
Zm00001d051806_P001	Maize	cytosol, plasma membrane	73.22	72.24
TraesCS6B01G327600.1	Wheat	cytosol	72.45	71.62
Zm00001d051244_P001	Maize	cytosol	16.96	71.54
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	71.87	71.05
Zm00001d025440_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	41.43	68.91
Zm00001d005701_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	41.23	68.59
Zm00001d033803_P001	Maize	plasma membrane, vacuole	41.04	68.27
Solyc01g005340.2.1	Tomato	plasma membrane	67.05	66.54
PGSC0003DMT400051426	Potato	plasma membrane	66.86	66.35
VIT_01s0011g05700.t01	Wine grape	cytosol	66.67	65.04
AT2G01680.1	Thale cress	cytosol, plasma membrane	65.7	64.1
KRH41712	Soybean	cytosol	65.13	64.02
KRH60413	Soybean	cytosol	64.74	63.4
CDY36249	Canola	cytosol	65.13	63.18
CDY17652	Canola	cytosol	64.55	62.85
Bra024863.1-P	Field mustard	cytosol	63.97	62.29
KRH49636	Soybean	cytosol	61.08	60.38
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	60.69	60.0
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	21.39	47.44
GSMUA_Achr11P...	Banana	cytosol	42.58	45.01
GSMUA_Achr6P34410_001	Banana	cytosol	43.16	43.92
GSMUA_Achr8P02120_001	Banana	cytosol	44.12	42.57
GSMUA_Achr9P04170_001	Banana	cytosol	41.23	41.96
GSMUA_Achr5P07190_001	Banana	cytosol	42.39	41.83
Zm00001d030264_P001	Maize	plastid	21.19	41.35
GSMUA_Achr6P33220_001	Banana	cytosol	43.16	40.95
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	45.09	40.55
GSMUA_Achr6P33230_001	Banana	cytosol	45.09	39.46
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	41.62	38.71
GSMUA_Achr7P23730_001	Banana	cytosol	22.16	36.28
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	44.32	35.38
GSMUA_Achr9P04150_001	Banana	plasma membrane	42.77	33.74
GSMUA_Achr9P03090_001	Banana	cytosol	34.68	21.51
GSMUA_Achr9P02740_001	Banana	cytosol	20.62	18.23
GSMUA_Achr7P12630_001	Banana	cytosol	21.19	16.9
GSMUA_Achr9P02700_001	Banana	cytosol	12.14	16.36
GSMUA_Achr9P02720_001	Banana	cytosol	12.14	16.2
GSMUA_Achr9P02690_001	Banana	plasma membrane	17.92	16.15

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr5G05930_001	EnsemblPlants:GSMUA_Achr5P05930_001	EnsemblPlants:GSMUA_Achr5T05930_001	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:M0SW22	PFAM:PF00023	PFAM:PF12796	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248
SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000294B627	SEG:seg	:	:

Description

Ankyrin repeat-containing protein At2g01680 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05930_001]

Coordinates

chr5:-:4416139..4419874

Molecular Weight (calculated)

57266.2 Da

IEP (calculated)

8.443

GRAVY (calculated)

0.071

Length

519 amino acids

Sequence
(BLAST)

001: MDLWLGSHQA FFAAVRSGDV DAVRCLVEEL DPAAAAALAT AQTEAGETAL YIAAENNSEE LFRYLLRFYD FEAAAIRSRV DLDAFHVAAK LGHVGIVKEL
101: LSLWPAFCRV CNSSNTSALY SAAVMDHLDV VNSILDVDES SARIVRKNGK TALHTAARVG YYQIVKALLQ RDPGIVSIID KKGQTALHMA VKGRSLDVVE
201: ALLQTDIAIL NMRDKKGNTA LHIATRKWRP QMVRLLLCYE SIEVNAINNQ NETAMDLAEK IPYGESQMDI LESLSEAGAK HSRNIGKDDD ELRRTVSDIK
301: HDVHTQFIQN AKTNKRMSGI AKELRKLHRE AVQNTINSVT MVAVLIASIA FMAIFNLPGQ YLQDGGEVGK AYIADVRGFR VFCLLNATAL FISLAVVVVQ
401: ITLVAWETRA QKQVVSVVNK LMWTACLSTC SAFLSLAYVV VGKQASWMAT TITAVGGPIM VGTLLTMSYL VLRQRFRIGE DSQRRIKRAS GSKSFSWSLY
501: SGYSDPDVFS DNEKKIYAL

Best Arabidopsis Sequence Match ( AT2G01680.1 )
(BLAST)

001: MEMKQMKFLT HQAFFSSVRS GDLSQLQQLV DNLTGDELID ESSPCSAVAE LMSVQNDAGE TAVYISAAEN LEDIFRYLIR FSSLETVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLRLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPSCAMIVRK NGKTSLHTAG RYGLLRIVKA LIEKDAAIVG VKDKKGQTAL
201: HMAVKGRSLE VVEEILQADY TILNERDRKG NTALHIATRK ARPQITSLLL TFTAIEVNAI NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTEG SHVGQANIAG RTGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITITLL GAPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSSKSFS WSYSHHVSDF EDESDFEKII AL

Arabidopsis Description

Ankyrin repeat-containing protein At2g01680 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU96]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.