Factsheet for GSMUA_Achr7P23720_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
peroxisome 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	peroxisome, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	62.39	57.48
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	86.32	35.01
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	88.46	31.85
VIT_05s0094g01320.t01	Wine grape	cytosol	73.08	29.28
KRG97307	Soybean	cytosol	69.66	29.21
KRH69034	Soybean	cytosol	70.51	29.15
KRH64845	Soybean	cytosol	68.8	29.11
CDY58363	Canola	cytosol	66.67	28.06
PGSC0003DMT400064924	Potato	cytosol	65.38	27.77
PGSC0003DMT400075256	Potato	cytosol	65.81	27.35
CDY15549	Canola	cytosol	64.96	27.24
Solyc08g014570.2.1	Tomato	cytosol, peroxisome, plasma membrane	64.96	27.05
GSMUA_Achr8P02120_001	Banana	cytosol	61.97	26.95
Solyc12g096670.1.1	Tomato	cytosol	65.81	26.83
Solyc12g019060.1.1	Tomato	cytosol	64.96	26.67
PGSC0003DMT400052568	Potato	cytosol	64.96	26.62
CDX86566	Canola	cytosol	64.1	26.0
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	66.67	25.28
GSMUA_Achr6P33230_001	Banana	cytosol	63.68	25.13
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	66.67	25.08
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	66.67	24.88
Bra030618.1-P	Field mustard	cytosol	64.96	24.84
CDY19113	Canola	cytosol	66.67	24.72
AT1G05640.1	Thale cress	cytosol	64.53	24.08
Bra021752.1-P	Field mustard	cytosol	66.67	23.96
AT2G31820.1	Thale cress	cytosol, nucleus, plasma membrane	66.67	23.57
GSMUA_Achr11P...	Banana	cytosol	46.15	22.0
GSMUA_Achr9P04170_001	Banana	cytosol	47.01	21.57
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	47.44	21.39
GSMUA_Achr9P04150_001	Banana	plasma membrane	59.83	21.28
GSMUA_Achr6P34410_001	Banana	cytosol	45.73	20.98
GSMUA_Achr5P07190_001	Banana	cytosol	47.01	20.91
GSMUA_Achr6P33220_001	Banana	cytosol	46.58	19.93
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	45.3	19.0
GSMUA_Achr9P03090_001	Banana	cytosol	40.17	11.23
GSMUA_Achr7P12630_001	Banana	cytosol	19.23	6.91
GSMUA_Achr9P02740_001	Banana	cytosol	14.96	5.96
GSMUA_Achr9P02690_001	Banana	plasma membrane	12.82	5.21
GSMUA_Achr7P23730_001	Banana	cytosol	6.84	5.05
GSMUA_Achr9P02700_001	Banana	cytosol	0.43	0.26
GSMUA_Achr9P02720_001	Banana	cytosol	0.43	0.26

Protein Annotations

EnsemblPlants:GSMUA_Achr7P23720_001	EnsemblPlants:GSMUA_Achr7T23720_001	EnsemblPlantsGene:GSMUA_Achr7G23720_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PGG_dom	PANTHER:PTHR24186	PANTHER:PTHR24186:SF8	PFAM:PF13962	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002954668	UniProt:M0TK58	MapMan:35.1	:	:	:

Description

Ankyrin repeat-containing protein At5g02620 [Source:GMGC_GENE;Acc:GSMUA_Achr7G23720_001]

Coordinates

chr7:-:25802810..25803727

Molecular Weight (calculated)

26336.7 Da

IEP (calculated)

10.579

GRAVY (calculated)

0.300

Length

234 amino acids

Sequence
(BLAST)

001: MTAAKQLKKT VSDIKHDVQS QLKQTRQTEM KVQKIKKRLQ KLHIGGLNNA INSNTVVAVL IATVAFAAIF QLPGQYVDLP QDGYSPGQAY IARNAAFIIF
101: LVFDSLALFI SLAVVVVQTS LIVVEQKAKR RMVFVMNKLM WLACLFISVS FISLTYVVVG RHEWWLAWAT MAIGTTIMLT TLGSMCYCVI VHRIEANNLR
201: NIRRNSGSRS RSWSLSVVSD SELLNSEYKK MYAL

Best Arabidopsis Sequence Match ( AT1G05640.1 )
(BLAST)

001: MSSLVPVMEK QESVRGNSVE EQQSLRCVGA ENQVRKGRAL DKQVSFLAVN VVEKHGIKGR AMEKQERAME RQRSFRGFVE KQKSFRVVME RQLSFMNVGG
101: ERKKKTDSPG KRGDSPLHLA ARTGNLGKVM ELIRACNGIE ELKELSSKQN LEGETPLYSA AENGHSLVVE EMLKHMDLDT ASVKARNGFD PFHVAAKQGH
201: IEALKKLLET FPNLAMTVDL SCTTALHTAA SQGHTDVVNL LLKTDSHLAK IAKNNGKTAL HSAARMGHRE VVKSLIGNDA SIGFRTDKKG QTALHMAVKG
301: QNEGIVLELV KPDPAILSVE DSKGNTPLHT ATNKGRIKIV RCLVSFDGIN LNAMNKAGDT ALDIAEKIGN PELVSVLKEA GAATAKDLGK PRNPAKQLNQ
401: TVSDIKHEVQ SQLQQSRQTG VRVRRIAKRL KKLHINGLNN AINSATVVAV LIATVAFAAI FTIPGQYEED RTKGLLLLGE ARIAGKAPFL VFFIFDSLAL
501: FISLAVVVVQ TSVVVIEQKA KKNLVFVINK LMWLACLFIS VAFVSLSFIV VGKEDIWLAI CATIIGGTIM LTTIGAMCYC VVMHRIEESK LKSLRKERSK
601: SKSFSLSHMP SESEILNGEF NKRMYAL

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SYK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.