Factsheet for GSMUA_Achr11P24530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04170_001	Banana	cytosol	87.37	84.12
GSMUA_Achr5P07190_001	Banana	cytosol	83.3	77.76
GSMUA_Achr6P33220_001	Banana	cytosol	86.56	77.7
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	86.35	75.99
GSMUA_Achr6P34410_001	Banana	cytosol	75.36	72.55
Bra038714.1-P	Field mustard	cytosol, plastid	76.37	64.99
KRG92972	Soybean	cytosol	76.78	64.44
Bra034760.1-P	Field mustard	cytosol	76.78	64.44
CDY42145	Canola	cytosol	76.78	64.44
AT3G12360.1	Thale cress	cytosol	76.99	64.07
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	75.76	63.7
CDY50551	Canola	cytosol	76.37	63.67
CDY50335	Canola	cytosol	76.37	63.67
Solyc05g054830.2.1	Tomato	nucleus	75.56	63.53
VIT_13s0067g03880.t01	Wine grape	cytosol	75.56	62.99
KRH36223	Soybean	cytosol	75.36	62.5
CDY07932	Canola	nucleus, plastid	74.34	60.93
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	79.02	60.81
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	74.95	59.93
CDX73985	Canola	nucleus	74.34	59.93
Bra001304.1-P	Field mustard	nucleus	74.34	59.93
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	82.89	59.68
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	82.48	58.53
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	82.48	58.36
Zm00001d047772_P002	Maize	plastid	82.48	58.19
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	82.28	58.13
Solyc10g084550.1.1	Tomato	plastid	69.04	57.95
EER95067	Sorghum	cytosol, nucleus, plasma membrane	81.06	57.85
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	82.69	57.43
CDY08436	Canola	cytosol	76.78	57.12
PGSC0003DMT400028722	Potato	cytosol, plastid	69.86	56.23
TraesCS4A01G102200.2	Wheat	nucleus	82.08	55.82
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	22.0	46.15
GSMUA_Achr8P02120_001	Banana	cytosol	48.27	44.05
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	45.01	42.58
GSMUA_Achr6P33230_001	Banana	cytosol	48.07	39.8
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	45.21	38.47
GSMUA_Achr9P04150_001	Banana	plasma membrane	46.84	34.95
GSMUA_Achr7P23730_001	Banana	cytosol	22.4	34.7
GSMUA_Achr9P03090_001	Banana	cytosol	59.06	34.65
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	45.62	34.46
GSMUA_Achr9P02740_001	Banana	cytosol	22.2	18.57
GSMUA_Achr9P02700_001	Banana	cytosol	13.65	17.4
GSMUA_Achr9P02720_001	Banana	cytosol	13.65	17.22
GSMUA_Achr7P12630_001	Banana	cytosol	22.4	16.9
GSMUA_Achr9P02690_001	Banana	plasma membrane	19.76	16.84

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G24530_001
EnsemblPlants:GSMUA_Achr11P24530_001	EnsemblPlants:GSMUA_Achr11T24530_001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0RV33
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000295E324	SEG:seg

Description

Ankyrin repeat-containing protein At3g12360 [Source:GMGC_GENE;Acc:GSMUA_Achr11G24530_001]

Coordinates

chr11:-:24020443..24024491

Molecular Weight (calculated)

53804.2 Da

IEP (calculated)

9.653

GRAVY (calculated)

0.018

Length

491 amino acids

Sequence
(BLAST)

001: MTGTAMGADF DADLAEIRAA VVNDVNEVEE TPLFTAAEKG FLDVVVELLK YSDRESLTRK NRSGFDVLHV AARQGHQAIV QILLDHDPTL IKTFGQSNAT
101: PLITAATRGH TEVVNLLLEQ DASLIELSKN NGKNALHFAA RQGYVEIVKA LLGKDPQLAR RTDKKGQTAL HMAVKGTSSE VVKALVDADP AIVMLPDRAG
201: NTALHVATRK KRAEIVNLLL LLPDTNVNAL TRDHKTAFDI VEGLPLSEES ADIKECLSRC GACRANELNQ PRDELRKTVT EIKQDVHIQL EQTRKTNKNV
301: HGIAKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGTQDTGVA VVVQKGSFKV FFIFNAIALF TSLAVVVVQI TLVRGETKAE RRVVEIINKL
401: MWLASVCTTV AFIASSYIVV GRHFQWAAIL VTLIGGVIMA GVLGTMTFYV VKSKRTRSIR KREKSMRRSA SSSWHHNSEL SDSEIDRIYA I

Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)

001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.