Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G202400.2 | Wheat | cytosol, nucleus, plasma membrane | 95.29 | 99.14 |
| HORVU4Hr1G058480.2 | Barley | cytosol, nucleus, plasma membrane | 93.91 | 97.55 |
| TraesCS4D01G203300.1 | Wheat | cytosol, nucleus, plasma membrane | 95.01 | 97.03 |
| Os03t0281000-01 | Rice | nucleus, peroxisome, plasma membrane | 84.21 | 89.15 |
| Zm00001d028679_P002 | Maize | cytosol, nucleus, plasma membrane | 82.41 | 85.98 |
| EER95067 | Sorghum | cytosol, nucleus, plasma membrane | 81.44 | 85.47 |
| Zm00001d047772_P002 | Maize | plastid | 81.99 | 85.06 |
| GSMUA_Achr11P... | Banana | cytosol | 55.82 | 82.08 |
| GSMUA_Achr9P04170_001 | Banana | cytosol | 57.2 | 80.98 |
| GSMUA_Achr7P15350_001 | Banana | cytosol, plastid | 61.77 | 79.93 |
| GSMUA_Achr5P07190_001 | Banana | cytosol | 58.17 | 79.85 |
| GSMUA_Achr6P33220_001 | Banana | cytosol | 58.59 | 77.33 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 59.0 | 72.95 |
| CDY42145 | Canola | cytosol | 58.86 | 72.65 |
| Bra034760.1-P | Field mustard | cytosol | 58.73 | 72.48 |
| Solyc05g054830.2.1 | Tomato | nucleus | 58.31 | 72.09 |
| Bra038714.1-P | Field mustard | cytosol, plastid | 57.34 | 71.75 |
| KRG92972 | Soybean | cytosol | 58.03 | 71.62 |
| AT3G12360.1 | Thale cress | cytosol | 58.45 | 71.53 |
| VIT_08s0040g02750.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 63.02 | 71.32 |
| CDY50551 | Canola | cytosol | 58.03 | 71.14 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 58.03 | 71.14 |
| CDY50335 | Canola | cytosol | 58.03 | 71.14 |
| KRH36223 | Soybean | cytosol | 57.2 | 69.76 |
| TraesCS3A01G354800.1 | Wheat | cytosol | 53.46 | 69.55 |
| CDY07932 | Canola | nucleus, plastid | 56.51 | 68.11 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 57.48 | 67.59 |
| Bra001304.1-P | Field mustard | nucleus | 56.79 | 67.32 |
| CDX73985 | Canola | nucleus | 56.79 | 67.32 |
| Solyc10g084550.1.1 | Tomato | plastid | 52.49 | 64.79 |
| CDY08436 | Canola | cytosol | 58.73 | 64.24 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 53.88 | 63.77 |
| TraesCS4A01G102300.1 | Wheat | cytosol | 32.96 | 43.59 |
| TraesCS7A01G265800.1 | Wheat | cytosol | 32.41 | 42.55 |
| TraesCS5A01G305200.1 | Wheat | cytosol | 30.33 | 38.76 |
| TraesCS7A01G417600.1 | Wheat | cytosol, peroxisome, plasma membrane | 17.45 | 21.5 |
| TraesCS3A01G351100.1 | Wheat | cytosol | 17.17 | 21.49 |
| TraesCS5A01G185200.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.84 | 20.21 |
| TraesCS3A01G529700.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.34 | 20.21 |
| TraesCS7A01G061700.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 8.31 | 19.93 |
| TraesCS2A01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 17.59 | 19.45 |
| TraesCS3A01G537000.1 | Wheat | cytosol, peroxisome, plasma membrane | 9.7 | 19.18 |
| TraesCS4A01G427100.1 | Wheat | plasma membrane | 15.79 | 19.13 |
| TraesCS5A01G339200.1 | Wheat | plasma membrane | 17.04 | 18.92 |
| TraesCS5A01G364500.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.62 | 18.66 |
| TraesCS5A01G436200.1 | Wheat | plasma membrane | 16.48 | 18.54 |
| TraesCS6A01G412200.1 | Wheat | cytosol | 11.22 | 18.54 |
| TraesCS5A01G338100.1 | Wheat | cytosol | 12.47 | 18.44 |
| TraesCS4A01G434700.1 | Wheat | plasma membrane | 16.48 | 18.42 |
| TraesCS6A01G412500.2 | Wheat | plasma membrane | 15.93 | 18.14 |
| TraesCS2A01G219300.4 | Wheat | plastid | 16.2 | 17.97 |
| TraesCS6A01G412600.1 | Wheat | plastid | 10.11 | 17.85 |
| TraesCS2A01G218100.1 | Wheat | cytosol | 14.54 | 17.53 |
| TraesCS1A01G013200.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.34 | 16.6 |
| TraesCS3A01G358000.2 | Wheat | cytosol | 16.62 | 16.44 |
| TraesCS7A01G022100.1 | Wheat | cytosol, peroxisome, plasma membrane | 14.96 | 16.17 |
| TraesCS1A01G044400.1 | Wheat | cytosol | 15.37 | 16.13 |
| TraesCS2A01G007400.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.07 | 16.0 |
| TraesCS3A01G529300.1 | Wheat | plasma membrane | 10.25 | 15.68 |
| TraesCS7A01G540100.1 | Wheat | cytosol, nucleus, plasma membrane | 15.1 | 14.59 |
| TraesCS7A01G061800.1 | Wheat | cytosol | 4.29 | 12.86 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF12796 |
| PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF107 |
| SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4A01G102200 | EnsemblPlants:TraesCS4A01G102200.2 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:114741879..114744546
Molecular Weight (calculated)
77825.9 Da
IEP (calculated)
10.298
GRAVY (calculated)
-0.110
Length
722 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDSDRGEG DLEIGLASPG SEGGGVSPVA PGRRALESCL SGKRLDQSPS PSRAVRRPAL VMSSSGKRLD QSPSPSRPAL VMSRSSNRLD QPPGRPVLAM
101: SRSSNRLDHS PASSSSPTPA KGPALVMSGS SKRLEQSLAS PSPSPKAGAA APPVLVLSNS GKRMDQAGRK KYVKQVTGRH NDTELHLAAQ RGDLDAVRQI
201: IVEIDAQMTG TGEEFDSEVA EIRAAVLNEP NEVGETALLI AAEKGFIDVV LELLNHSDKE SLARKNKSGF DALHVAAKEG HRDIVKVLLD HDPSLGKTFG
301: QSNVTPLITA AIRGHLEVVN LLLERVSGLV ELSKANGKNA LHFAARQGHV EIVKSLLVSE AQLARKTDKK GQTALHMAVK GTSAAVVRAL VNADPAIVML
401: PDKNGNLALH VATRKKRSEV FFCHVKSCAQ NAIIFFSCLT NWCLLQIVNE LLLLPDMNVN ALTRDRKTAF DIAEGLPLSE ESADIKDCLS RAGAVRANDL
501: NQPRDELRKT VTEIKKDVHT QLEQARKTNK NVHGIAKELR KLHREGINNA TNSVTVVAVL FATVAFAAIF TVPGGNDDHG VAIVVHAVSF KVFFIFNAIA
601: LFTSLAVVVV QITLVRGETK AERRVVEVIN KLMWLASVCT TVAFISSSYI VVGRHFKWAA LLVTLIGGVI MASVLGTMTY YVVKSKRTRS IRKKVKSTRR
701: SGSNSWNHNS ESDSEIDRIY AI
101: SRSSNRLDHS PASSSSPTPA KGPALVMSGS SKRLEQSLAS PSPSPKAGAA APPVLVLSNS GKRMDQAGRK KYVKQVTGRH NDTELHLAAQ RGDLDAVRQI
201: IVEIDAQMTG TGEEFDSEVA EIRAAVLNEP NEVGETALLI AAEKGFIDVV LELLNHSDKE SLARKNKSGF DALHVAAKEG HRDIVKVLLD HDPSLGKTFG
301: QSNVTPLITA AIRGHLEVVN LLLERVSGLV ELSKANGKNA LHFAARQGHV EIVKSLLVSE AQLARKTDKK GQTALHMAVK GTSAAVVRAL VNADPAIVML
401: PDKNGNLALH VATRKKRSEV FFCHVKSCAQ NAIIFFSCLT NWCLLQIVNE LLLLPDMNVN ALTRDRKTAF DIAEGLPLSE ESADIKDCLS RAGAVRANDL
501: NQPRDELRKT VTEIKKDVHT QLEQARKTNK NVHGIAKELR KLHREGINNA TNSVTVVAVL FATVAFAAIF TVPGGNDDHG VAIVVHAVSF KVFFIFNAIA
601: LFTSLAVVVV QITLVRGETK AERRVVEVIN KLMWLASVCT TVAFISSSYI VVGRHFKWAA LLVTLIGGVI MASVLGTMTY YVVKSKRTRS IRKKVKSTRR
701: SGSNSWNHNS ESDSEIDRIY AI
001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.