Factsheet for GSMUA_Achr7P15350_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 3
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P07190_001	Banana	cytosol	83.87	88.97
GSMUA_Achr11P...	Banana	cytosol	75.99	86.35
GSMUA_Achr9P04170_001	Banana	cytosol	75.81	82.94
GSMUA_Achr6P33220_001	Banana	cytosol	77.96	79.52
GSMUA_Achr6P34410_001	Banana	cytosol	69.35	75.88
Bra038714.1-P	Field mustard	cytosol, plastid	74.19	71.75
KRG92972	Soybean	cytosol	75.09	71.62
Solyc05g054830.2.1	Tomato	nucleus	74.55	71.23
CDY42145	Canola	cytosol	74.37	70.94
VIT_13s0067g03880.t01	Wine grape	cytosol	74.73	70.8
Bra034760.1-P	Field mustard	cytosol	74.19	70.77
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	74.01	70.72
AT3G12360.1	Thale cress	cytosol	74.37	70.34
CDY50335	Canola	cytosol	74.19	70.29
CDY50551	Canola	cytosol	74.01	70.12
KRH36223	Soybean	cytosol	74.01	69.76
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.24	67.55
CDY07932	Canola	nucleus, plastid	72.4	67.45
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	81.36	66.57
CDX73985	Canola	nucleus	72.58	66.5
Bra001304.1-P	Field mustard	nucleus	72.58	66.5
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	73.12	66.45
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	81.36	65.61
EER95067	Sorghum	cytosol, nucleus, plasma membrane	80.82	65.55
Zm00001d047772_P002	Maize	plastid	81.36	65.23
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	80.65	64.75
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	80.29	64.55
Solyc10g084550.1.1	Tomato	plastid	67.38	64.27
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	80.47	63.51
CDY08436	Canola	cytosol	74.19	62.73
PGSC0003DMT400028722	Potato	cytosol, plastid	68.28	62.46
TraesCS4A01G102200.2	Wheat	nucleus	79.93	61.77
GSMUA_Achr8P02120_001	Banana	cytosol	44.27	45.91
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	19.0	45.3
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	38.71	41.62
GSMUA_Achr6P33230_001	Banana	cytosol	43.73	41.15
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	41.58	40.21
GSMUA_Achr7P23730_001	Banana	cytosol	22.22	39.12
GSMUA_Achr9P04150_001	Banana	plasma membrane	43.01	36.47
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	42.11	36.15
GSMUA_Achr9P03090_001	Banana	cytosol	53.76	35.84
GSMUA_Achr9P02720_001	Banana	cytosol	14.7	21.08
GSMUA_Achr9P02700_001	Banana	cytosol	14.34	20.78
GSMUA_Achr9P02740_001	Banana	cytosol	21.51	20.44
GSMUA_Achr7P12630_001	Banana	cytosol	22.4	19.2
GSMUA_Achr9P02690_001	Banana	plasma membrane	19.71	19.1

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr7G15350_001
EnsemblPlants:GSMUA_Achr7P15350_001	EnsemblPlants:GSMUA_Achr7T15350_001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0THS2
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000295B5F7	SEG:seg

Description

Ankyrin repeat-containing protein At3g12360 [Source:GMGC_GENE;Acc:GSMUA_Achr7G15350_001]

Coordinates

chr7:+:12286610..12290652

Molecular Weight (calculated)

61206.9 Da

IEP (calculated)

9.717

GRAVY (calculated)

-0.061

Length

558 amino acids

Sequence
(BLAST)

001: MEQAASAAAS PTAAPALVLS NSGKRIDPSV KKKYVKQVTG RHNDTELHLA AQRGDLAAVR QILGEIDAQV TGTPGEAEFD AEVAEIRAAV VNEVNEVEET
101: PLFIAAEKGF LDIVVELLKY SNRESLSRKN RSGFDALHVA AREGNREIVQ VLLDHDPTLI KTFGQSNATP LITAAIRGHT EIVNLLLERD ASLIELPKAN
201: GKNALHFAAR QGHVEIVKAL LEKDPQLARR TDKKGQTALH MAVKGTHCEV VNALVDADPA IVMLPDRAGN TVLHVATRKK RAEIVKVLLH LPDTNVNALT
301: RDHKTAFDIA EGLPLSEESA EIKEWLTRYD AVRANELNQP RDELRKTVTE IKKDVHIQLE QTRKTNKNVH GIAKELRKLH REGINNATNS VTVVAVLFAT
401: VAFAAIFTVP GGTQEDGTAI VVHSASFKIF FIFNAIALFT SLAVVVVQIT LVRGETKAER RVVEIINKLM WLASVCTTVA FIASSFIVLG RHIRWAAILV
501: TLIGGLIMTG VLGTMTFYVV KSKHSRAMRK RTKSRSGSNS WQHNSEISDS EIDRIYAI

Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)

001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.