CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

cytosol 1
plastid 2
nucleus 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001304.1-P	Field mustard	nucleus	99.83	98.19
CDX73985	Canola	nucleus	99.83	98.19
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	95.66	93.32
GSMUA_Achr5P07190_001	Banana	cytosol	65.78	74.9
GSMUA_Achr11P...	Banana	cytosol	60.93	74.34
GSMUA_Achr9P04170_001	Banana	cytosol	62.94	73.92
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.96	73.2
GSMUA_Achr6P34410_001	Banana	cytosol	61.77	72.55
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	67.45	72.4
CDY42145	Canola	cytosol	70.12	71.79
Solyc10g084550.1.1	Tomato	plastid	70.12	71.79
CDY50551	Canola	cytosol	69.78	70.97
CDY50335	Canola	cytosol	69.62	70.8
GSMUA_Achr6P33220_001	Banana	cytosol	64.44	70.57
PGSC0003DMT400028722	Potato	cytosol, plastid	70.78	69.51
EES03848	Sorghum	cytosol	60.77	65.47
Zm00001d042948_P001	Maize	cytosol	60.77	65.35
Os01t0837000-01	Rice	cytosol	60.1	64.75
TraesCS3A01G354800.1	Wheat	cytosol	59.93	64.68
HORVU3Hr1G087050.1	Barley	cytosol	59.43	64.38
TraesCS3B01G387800.2	Wheat	cytosol	59.43	64.26
TraesCS3D01G348800.2	Wheat	cytosol	59.43	64.14
CDY08436	Canola	cytosol	69.95	63.48
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	68.11	59.82
Zm00001d047772_P002	Maize	plastid	68.45	58.91
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	68.28	58.85
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	67.95	58.81
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	68.11	58.79
EER95067	Sorghum	cytosol, nucleus, plasma membrane	66.94	58.28
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	68.78	58.27
TraesCS4A01G102200.2	Wheat	nucleus	68.11	56.51
CDY55069	Canola	cytosol, peroxisome, plasma membrane	18.53	46.25
CDX93618	Canola	cytosol	21.87	45.49
CDX88738	Canola	plastid	39.57	44.22
CDX95126	Canola	cytosol	39.57	43.89
CDX71059	Canola	plastid	39.57	43.41
CDY70132	Canola	cytosol	36.39	41.37
CDY58363	Canola	cytosol	38.23	41.19
CDY10435	Canola	cytosol	36.23	41.18
CDY15549	Canola	cytosol	37.9	40.68
CDY17652	Canola	cytosol	34.56	38.84
CDY36249	Canola	cytosol	34.56	38.69
CDY19113	Canola	cytosol	39.4	37.4
GSMUA_Achr9P03090_001	Banana	cytosol	49.75	35.6
CDX86566	Canola	cytosol	34.06	35.36
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	36.56	35.21
CDX73200	Canola	cytosol	17.53	34.77
CDY59983	Canola	cytosol	17.53	34.77
CDX99605	Canola	cytosol	16.36	34.39
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	35.56	33.97
CDY58683	Canola	cytosol	12.69	24.92
CDY16445	Canola	cytosol, plasma membrane, plastid	21.87	23.19
CDY16446	Canola	cytosol	0.5	21.43
CDY20635	Canola	plasma membrane	20.37	20.93
CDY20943	Canola	cytosol	19.53	20.35
CDY69308	Canola	plasma membrane	20.03	20.24
CDY20639	Canola	cytosol, peroxisome, plasma membrane	15.36	20.09
CDY39673	Canola	plasma membrane	20.03	20.0
CDX74181	Canola	cytosol, peroxisome, plasma membrane	18.86	19.55
CDY40658	Canola	cytosol, peroxisome, plasma membrane	18.53	19.24
CDY40662	Canola	plasma membrane	18.2	18.89
CDY30009	Canola	cytosol, plasma membrane, plastid	18.53	18.81
CDY18182	Canola	cytosol, peroxisome, plasma membrane	16.53	17.55
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	4.51	17.42
CDY48208	Canola	cytosol	18.03	17.34
CDY58682	Canola	cytosol	2.34	16.67
CDY35767	Canola	cytosol, peroxisome, plasma membrane	16.86	16.5
CDY42176	Canola	cytosol, peroxisome, plasma membrane	17.2	15.92
CDY45914	Canola	cytosol	11.52	15.72
CDY48209	Canola	cytosol, peroxisome, plasma membrane	16.36	13.88
CDY21967	Canola	plasma membrane	16.36	12.98
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	15.19	12.85
CDY21969	Canola	nucleus	5.34	9.55
CDY20642	Canola	nucleus	15.19	6.38

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	MapMan:35.1	GO:A0A078F4E1	UniProt:A0A078F4E1	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY07932	ProteinID:CDY07932	ProteinID:CDY07932.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00125135001
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248
SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0004EEF061	SEG:seg	:	:

Description

BnaC03g35910DBnaC03g35910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4E1]

Coordinates

chrLK031982:+:179642..182733

Molecular Weight (calculated)

65430.8 Da

IEP (calculated)

9.963

GRAVY (calculated)

-0.187

Length

599 amino acids

Sequence
(BLAST)

001: MEPDMEKGWA TDPVSPAGST VADLSSPTPT PRKTLVLSNS GKALMVSNSS KSLGLSNSGK RFDPTGKKKY VKQVTGRHND TELHLAAQRG DLAAVKQILS
101: DIDSQITGTI SGSDFDDEVA QIMTSVVNEV NELGETPLFT AAEKGNIDVV KELLCYTTKE SLMQKNLSGF DALHIACSQG HRAIVQLLLE HEPLLSKTVA
201: QSNATPLVSA ATRGHSEVVN ELLAKDSSLL EISRSNGKNA LHLAARQGHV DIVRTLLDKD PQLARRTDKK GQTSLHMAVK GISSEVVRLL LRADPAIVML
301: PDKFGNTVLH IATRKKRAEI VNELLQLPDT NVNALTRDHK TAYDIAEGLT HSEETQEIKE ILSRCGALKA NELNQPRDEL RKTVTEIKKD VHTQLEQTRR
401: TNKNVDGIAK ELRKLHRAGI NNATNSVTVV AVLFATVAFA AIFTVPGGDD DNGVAVMVHA TSFKIFFIFN AIALFTSLAV VVVQITLVRG ETKTERRVVE
501: VINKLMWLAS VCTSVAFISS SYIVVGRRNR YAAVVVTVIG TVTMTGILSI MTYYVVKSKR TRKVRKKEKK KKFGRTGTGS WHNANPSETE SEVNPIYAI

Best Arabidopsis Sequence Match ( AT3G09550.2 )
(BLAST)

001: MKKKKRQPKK RIEEEKELEP GMEKGLATDP TSPTGSTVAD LSPTPTPRKT LVLSNSGKAL MVSNSSKSLG LSNSGKRFDP TGKKKYVKQV TGRHNDTELH
101: LAAQRGDLAS VKQILSDIDS QITGTITGAD FDDEVAQIMT SVVNEVNELG ETPLFTAAEK GNIDVVKELL PYTTIESLMQ KNLSGFDALH IACSQGHRSI
201: VQLLLEHEPQ LSKTVAQSNA TPLVSAATRG HSEVVNELLA KDSSLLEISR SNGKNALHLA ARQGHVDIVR TLLDKDPQLA RRTDKKGQTS LHMAVKGVSS
301: QVVRLLLRAD PAIVMLPDKF GNTVLHIATR KKRAEIVNEL LQLPDTNVNA LTRDHKTAYD IAEGLTHSEE TAEIKEILSR CGALKANELN QPRDELRKTV
401: TEIKKDVHTQ LEQTRKTNKN VDGIAKELRK LHRAGINNAT NSVTVVAVLF ATVAFAAIFT VPGGDDDHGV AVMVHATSFK IFFIFNAIAL FTSLAVVVVQ
501: ITLVRGETKT ERRVVEVINK LMWLASVCTT VAFISSSYIV VGRRNRYAAV VVTVIGTVTM TGILSIMTYY VVKSKRTRIV RKKEKKKSAR NGTSSWHHAN
601: PSETESEVNP IYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.