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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 95.48 94.28
CDY21969 Canola nucleus 43.36 91.64
CDY48209 Canola cytosol, peroxisome, plasma membrane 65.25 65.44
AT4G03440.1 Thale cress cytosol 65.96 62.18
CDY42176 Canola cytosol, peroxisome, plasma membrane 44.21 48.38
CDY45915 Canola extracellular, plasma membrane, plastid, vacuole 8.76 40.0
CDY35767 Canola cytosol, peroxisome, plasma membrane 34.04 39.38
CDY45914 Canola cytosol 23.73 38.27
CDY48208 Canola cytosol 33.62 38.2
VIT_12s0059g00130.t01 Wine grape cytosol 18.22 33.86
VIT_12s0059g00110.t01 Wine grape cytosol 17.66 32.3
VIT_12s0059g00150.t01 Wine grape cytosol 17.51 32.04
VIT_12s0059g00090.t01 Wine grape cytosol 16.24 32.03
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 26.13 31.79
CDY18182 Canola cytosol, peroxisome, plasma membrane 25.28 31.74
CDY58683 Canola cytosol 13.42 31.15
VIT_12s0028g04020.t01 Wine grape plasma membrane 13.84 30.82
VIT_12s0059g00060.t01 Wine grape cytosol 21.61 29.77
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 27.97 29.73
VIT_12s0059g00050.t01 Wine grape plasma membrane 26.84 29.37
VIT_12s0028g03960.t01 Wine grape plasma membrane 16.67 28.37
VIT_12s0028g03990.t01 Wine grape cytosol 23.31 27.82
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 26.41 27.62
KRH25555 Soybean cytosol, peroxisome, plasma membrane 25.28 27.25
KRH25567 Soybean plasma membrane 24.58 27.19
KRH25558 Soybean cytosol, peroxisome, plasma membrane, plastid 24.58 26.93
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 24.29 25.79
CDY21967 Canola plasma membrane 27.12 25.43
KRH55987 Soybean cytosol, peroxisome, plasma membrane 23.87 25.34
KRH55986 Soybean cytosol 9.18 25.29
VIT_12s0028g04010.t01 Wine grape cytosol 15.68 24.78
KRH55979 Soybean mitochondrion, nucleus 7.63 24.55
KRH55981 Soybean cytosol 20.2 23.91
KRH55978 Soybean cytosol, peroxisome, plasma membrane 21.89 23.63
CDY16445 Canola cytosol, plasma membrane, plastid 18.79 23.54
KRH55984 Soybean cytosol 21.61 23.04
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 26.69 22.96
CDY40658 Canola cytosol, peroxisome, plasma membrane 17.37 21.32
CDY40662 Canola plasma membrane 17.23 21.14
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 26.41 21.11
CDX74181 Canola cytosol, peroxisome, plasma membrane 16.95 20.76
CDY30009 Canola cytosol, plasma membrane, plastid 16.53 19.83
CDY10435 Canola cytosol 13.84 18.6
VIT_12s0059g00120.t01 Wine grape cytosol 21.47 18.42
CDY70132 Canola cytosol 13.7 18.41
CDX88738 Canola plastid 13.84 18.28
CDX71059 Canola plastid 13.98 18.13
CDX95126 Canola cytosol 13.56 17.78
CDY58363 Canola cytosol 13.84 17.63
CDY55069 Canola cytosol, peroxisome, plasma membrane 5.79 17.08
CDY15549 Canola cytosol 13.28 16.85
CDX93618 Canola cytosol 6.64 16.32
CDY19113 Canola cytosol 13.84 15.53
CDY50335 Canola cytosol 12.85 15.45
CDY50551 Canola cytosol 12.71 15.28
CDY42145 Canola cytosol 12.57 15.21
CDY07932 Canola nucleus, plastid 12.85 15.19
CDY42071 Canola cytosol, nucleus, plasma membrane, plastid 13.28 15.11
CDX73985 Canola nucleus 12.71 14.78
CDX86566 Canola cytosol 12.01 14.73
CDY34515 Canola cytosol, nucleus, plasma membrane, plastid 12.71 14.35
CDY17652 Canola cytosol 10.73 14.26
CDY36249 Canola cytosol 10.73 14.21
CDY69308 Canola plasma membrane 11.58 13.83
CDY39673 Canola plasma membrane 11.58 13.67
CDY08436 Canola cytosol 12.57 13.48
CDY20635 Canola plasma membrane 11.02 13.38
CDY58682 Canola cytosol 1.55 13.1
CDY59983 Canola cytosol 5.51 12.91
CDX73200 Canola cytosol 5.51 12.91
CDY20943 Canola cytosol 10.45 12.87
CDX99605 Canola cytosol 4.8 11.93
CDY20639 Canola cytosol, peroxisome, plasma membrane 7.49 11.57
CDY20642 Canola nucleus 8.33 4.13
CDY16446 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1GO:A0A078IHI8UniProt:A0A078IHI8InterPro:ACD6InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfEnsemblPlants:CDY48563ProteinID:CDY48563ProteinID:CDY48563.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0006950GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009719GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0031347
GO:GO:0071446GO:GO:2000031EnsemblPlantsGene:GSBRNA2T00091299001InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770
PFAM:PF12796PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177
PANTHER:PTHR24177:SF109SMART:SM00248SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0004EEC708SEG:seg
Description
BnaA09g01590DBnaA09g01590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHI8]
Coordinates
chrLK032779:-:75439..78043
Molecular Weight (calculated)
78922.4 Da
IEP (calculated)
7.241
GRAVY (calculated)
-0.125
Length
708 amino acids
Sequence
(BLAST)
001: MDSSEACLDR IESQRSTDVS SSDQRKRRYF LMNLMNNGAN RICSRGSPES QRECTQPPKG DKEPVPEFIT SLRFSDLYNL PGESVAMNSE ILSAMRAGNI
101: EFLEKMKRFE TPMACFKNNK GDSILHLAAS YGHLELAKGI VSACPSLLLE PNWEDRVPLH VAARAGRSAV VEALVASVTY FSAGQSKEER ERLLNLYVLK
201: DKDGDTPLHL ALKDLHEKTE LLMYQRRTKN QSISHLVMHQ RSIRCSSFQT RLMETAACLV NASQHVSFLA NKDGISPLYL AVLAGNVSLV NAMLNVQGKT
301: SDLASQLEGR KSLVHAALKA KNTDVLDIIL NEDPCLLNER DEDGRTCLSV GASVGFYKGV CKLLDRSTSS VFECDDDGSF PIHIAVEKGH VDVVKEILKR
401: CPDSIEQLNK EGQNVLHIAA KSGKAVSFLM GYIKRLGTKN HLIKEQDVNG NTPLHLATIN WRPRTTFAMT NPEILNIQNK DGLRPLDIAE INLQSDYVLR
501: ERMTLMVLLC VYKPRGVTWR PTSGMTLRSR SETLSGYGEK YKDRFTMPGG FNNSGMAVLV DDKTFSNFLV CDTLAMQCSV IAIVALIWAQ LGDQELAHRA
601: FHLALPSLFF ALFFMSSAFI YGINAAVQQN IVLDDKIHII SAIFCNVMLI LLGPYVIPQV SGIPLVQDLT SLYLYVLLWF VSEDDDEKHH ISKCVKKESM
701: GSSRVEQV
Best Arabidopsis Sequence Match ( AT4G03440.1 )
(BLAST)
001: MARRGLRMDN SEAHLDRIEA QRSTDDQHKR RCFPVNVIKN LGTLSSRSFL RRRGDEATPP TTTIDIESVP KFLTTLRLLD LYNHPGEYVA MNSEISSAMR
101: AGNKEFLEKM ESYETPMSCF KNNKGDSILH LAAAFGHLEL VKSIVSKFPS LLLELNFKDQ LPLHVAARDG HLTVVKALVA SVTFCSDRLA EEDRERLNPY
201: ILKDKNGDTA LHSALKDLHE KTKELHEKTK DMHWLRRSKS KSLSNESTHL METAACLVNA NQDVSFLANK DEISPLYLAV EAGNVSLVNA MLNSHVNNVQ
301: DKTFNLATQL KGRKSLVHAA LKAKNTDVLD VILGKYPSLV KERDEKGRTC LSVGASVGFY QGICKLLDTS TLSIFDCDDD GSFPIHKAVE KGHENVVKEL
401: LKRFPDSVEQ LNKEGQNIFH ISAKSGKSTL FLMEHINKVD TKNHLMEEQD MDGNTPLHLA TINWRPKTVR MLTKFLSIRK KLLDKHNSVG LRPLDIAEIN
501: LQSDYVFRER MTLMVLLGVY NLRQRGISLL PTSGMTLRSR SEKLGDGEKY KDRVNILLLV AALVATMTFA AGFTMPGGFS SSAPNTGMAI LVDDRYLTTF
601: IMNDTIAMLT SVLAIVALIW AQLGDPELAH RAFHLALPAL FVALLFMCFT FFYGVLATIQ HNIVLSRIIS FVFIILFIMT GTLLTPYVIP QVYGLPIIGV
701: LTSSYLDFLL LFVNEDDDEK HYTTGSSHTC VKSGESMGSS SGVQAEKSKV L
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT72]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.