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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005639.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 98.07 98.87
CDY34515 Canola cytosol, nucleus, plasma membrane, plastid 96.14 95.37
CDY58363 Canola cytosol 80.71 90.29
AT2G31820.1 Thale cress cytosol, nucleus, plasma membrane 92.6 87.01
CDY19113 Canola cytosol 87.78 86.53
CDY15549 Canola cytosol 74.92 83.51
CDX86566 Canola cytosol 70.58 76.08
KRG97307 Soybean cytosol 65.27 72.76
KRH27553 Soybean cytosol, peroxisome, plasma membrane 29.58 72.44
KRH69034 Soybean cytosol 65.59 72.08
VIT_05s0094g01320.t01 Wine grape cytosol 67.04 71.4
Solyc12g019060.1.1 Tomato cytosol 61.41 67.02
GSMUA_Achr7P23720_001 Banana cytosol, peroxisome, plasma membrane 25.08 66.67
PGSC0003DMT400052568 Potato cytosol 61.09 66.55
Solyc12g096670.1.1 Tomato cytosol 60.61 65.68
PGSC0003DMT400064924 Potato cytosol 57.56 64.97
PGSC0003DMT400075256 Potato cytosol 58.68 64.83
KRH64845 Soybean cytosol 57.56 64.74
Solyc08g014570.2.1 Tomato cytosol, peroxisome, plasma membrane 58.2 64.41
GSMUA_Achr11P... Banana cytosol, mitochondrion, peroxisome, plasma membrane 54.34 58.58
TraesCS7B01G166600.1 Wheat cytosol 51.77 58.55
TraesCS7D01G268900.1 Wheat cytosol 51.77 58.55
EES15259 Sorghum cytosol 52.89 58.54
Os08t0542700-01 Rice cytosol 52.41 58.53
HORVU7Hr1G056430.1 Barley cytosol 51.77 58.44
TraesCS7A01G265800.1 Wheat cytosol 51.29 58.0
Zm00001d031706_P001 Maize cytosol 51.77 57.4
CDX93618 Canola cytosol 26.37 56.94
Os09t0518500-01 Rice cytosol 51.29 56.76
EER97054 Sorghum cytosol 51.29 56.76
Zm00001d006142_P002 Maize cytosol 50.96 56.41
Zm00001d006147_P002 Maize cytosol 50.96 56.41
TraesCS5D01G312200.1 Wheat cytosol 50.96 56.11
TraesCS5B01G305700.1 Wheat cytosol 50.96 56.11
Zm00001d021169_P002 Maize cytosol 51.61 56.02
HORVU5Hr1G079730.3 Barley cytosol 50.8 55.93
TraesCS5A01G305200.1 Wheat cytosol 50.48 55.58
CDY55069 Canola cytosol, peroxisome, plasma membrane 21.22 55.0
CDX95126 Canola cytosol 47.43 54.63
CDX88738 Canola plastid 46.95 54.48
CDX71059 Canola plastid 47.43 54.03
GSMUA_Achr11P... Banana cytosol, mitochondrion, plasma membrane, plastid 55.79 53.38
GSMUA_Achr7P23730_001 Banana cytosol 27.01 53.0
CDY10435 Canola cytosol 41.16 48.58
CDY70132 Canola cytosol 40.84 48.2
CDX73200 Canola cytosol 20.74 42.72
CDX99605 Canola cytosol 19.45 42.46
CDY59983 Canola cytosol 20.42 42.05
CDY17652 Canola cytosol 33.76 39.4
CDY36249 Canola cytosol 33.76 39.25
CDY42145 Canola cytosol 35.05 37.27
CDY50551 Canola cytosol 34.89 36.84
CDY50335 Canola cytosol 34.73 36.67
CDY07932 Canola nucleus, plastid 35.21 36.56
CDX73985 Canola nucleus 35.37 36.12
CDY08436 Canola cytosol 35.05 33.03
CDY45915 Canola extracellular, plasma membrane, plastid, vacuole 5.47 21.94
CDY58683 Canola cytosol 10.61 21.64
CDY16445 Canola cytosol, plasma membrane, plastid 19.45 21.42
CDY20635 Canola plasma membrane 19.94 21.27
CDY69308 Canola plasma membrane 20.26 21.25
CDY20943 Canola cytosol 19.61 21.22
CDY39673 Canola plasma membrane 20.42 21.17
CDY20639 Canola cytosol, peroxisome, plasma membrane 14.95 20.31
CDY18182 Canola cytosol, peroxisome, plasma membrane 17.85 19.68
CDX74181 Canola cytosol, peroxisome, plasma membrane 17.04 18.34
CDY30009 Canola cytosol, plasma membrane, plastid 17.2 18.14
CDY58682 Canola cytosol 2.41 17.86
CDY40658 Canola cytosol, peroxisome, plasma membrane 16.56 17.85
CDY40662 Canola plasma membrane 16.56 17.85
CDY48208 Canola cytosol 17.52 17.5
CDY35767 Canola cytosol, peroxisome, plasma membrane 17.04 17.32
CDY42176 Canola cytosol, peroxisome, plasma membrane 16.88 16.23
CDY45914 Canola cytosol 10.61 15.03
CDY48209 Canola cytosol, peroxisome, plasma membrane 17.04 15.01
CDY21967 Canola plasma membrane 18.01 14.83
CDY48563 Canola cytosol, nucleus, plasma membrane, plastid 15.11 13.28
CDY21969 Canola nucleus 5.63 10.45
CDY16446 Canola cytosol 0.16 7.14
CDY20642 Canola nucleus 15.11 6.59
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1GO:A0A078HWH6UniProt:A0A078HWH6InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfEnsemblPlants:CDY42071ProteinID:CDY42071ProteinID:CDY42071.1ncoils:CoilGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00074110001
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770PFAM:PF12796PFAM:PF13637PFAM:PF13962
InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24186PANTHER:PTHR24186:SF8SMART:SM00248
SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0004EF4B71SEG:seg::
Description
BnaA05g11150DBnaA05g11150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWH6]
Coordinates
chrLK032514:+:45940..48163
Molecular Weight (calculated)
68566.3 Da
IEP (calculated)
9.933
GRAVY (calculated)
-0.221
Length
622 amino acids
Sequence
(BLAST)
001: MEEKQSSPVS ENHQQTKTME KQQSFRCVEN NNNQPRKARS LEKQVSFQGV SVENHHHPSR LGRSMEKQQS FRGVATAENQ KRGVIMERQK SFRGGFLEKQ
101: KSFRVVMERQ LSFIGERRKK TESPGKRGDS PLHIAARTGN LGKVRELIRG GCDGEELREL LSKQNLEGET PLYTAAENGH SAVVEEMLER MDLQTASIAA
201: RNGFDPFHVA AKQGHLEVLK ILLETFPNLA MTTDLLCTTA LHTAATQGHI DVVNLLLETD SNLAKIAKNN GKTALHSAAR MGHVEGQTAL HMAVKGQNDG
301: IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLL SFEGINLNPI NKAGDTPLDV AERIGNAELA SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD
401: IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP GQYEEDRSKG DLLGQAHIAN KAPFLVFFIF DSLALFISLA
501: VVVVQTSVVV IEEKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI GGTIMLTTIG AMCYCVIMHR VEESKLKSIR KERSKSQSFS
601: MSRMPSDSEI LNGEYNKRMY AL
Best Arabidopsis Sequence Match ( AT2G31820.1 )
(BLAST)
001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.