Factsheet for Solyc12g096670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075256	Potato	cytosol	95.3	97.16
Solyc12g019060.1.1	Tomato	cytosol	82.93	83.51
Solyc08g014570.2.1	Tomato	cytosol, peroxisome, plasma membrane	80.84	82.56
KRG97307	Soybean	cytosol	72.82	74.91
KRH69034	Soybean	cytosol	73.0	74.03
VIT_05s0094g01320.t01	Wine grape	cytosol	74.22	72.95
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	32.06	72.44
CDY58363	Canola	cytosol	67.94	70.14
CDY15549	Canola	cytosol	64.63	66.49
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	26.83	65.81
KRH64845	Soybean	cytosol	62.02	64.38
CDY19113	Canola	cytosol	69.69	63.39
Bra021752.1-P	Field mustard	cytosol	70.03	61.75
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	62.02	61.7
TraesCS7D01G268900.1	Wheat	cytosol	59.06	61.64
Bra030618.1-P	Field mustard	cytosol	65.68	61.6
TraesCS7B01G166600.1	Wheat	cytosol	58.88	61.45
HORVU7Hr1G056430.1	Barley	cytosol	58.88	61.34
AT1G05640.1	Thale cress	cytosol	66.9	61.24
TraesCS7A01G265800.1	Wheat	cytosol	58.54	61.09
AT2G31820.1	Thale cress	cytosol, nucleus, plasma membrane	70.21	60.88
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	65.68	60.61
TraesCS5A01G305200.1	Wheat	cytosol	59.23	60.18
TraesCS5B01G305700.1	Wheat	cytosol	59.23	60.18
HORVU5Hr1G079730.3	Barley	cytosol	59.06	60.0
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	65.33	59.81
TraesCS5D01G312200.1	Wheat	cytosol	58.71	59.65
Os08t0542700-01	Rice	cytosol	57.84	59.6
Zm00001d031706_P001	Maize	cytosol	58.01	59.36
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	63.76	59.32
EES15259	Sorghum	cytosol	58.01	59.25
Zm00001d006142_P002	Maize	cytosol	57.67	58.9
Zm00001d006147_P002	Maize	cytosol	57.67	58.9
EER97054	Sorghum	cytosol	57.49	58.72
CDX86566	Canola	cytosol	58.71	58.41
Os09t0518500-01	Rice	cytosol	56.79	58.01
Zm00001d021169_P002	Maize	cytosol	57.67	57.77
GSMUA_Achr7P23730_001	Banana	cytosol	31.88	57.73
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	62.72	55.38
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	49.83	53.46
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	49.48	52.5
Solyc11g072960.1.1	Tomato	cytosol	48.08	51.98
Solyc06g005240.2.1	Tomato	cytosol	37.98	48.44
Solyc01g005340.2.1	Tomato	plasma membrane	38.85	42.64
Solyc05g054830.2.1	Tomato	nucleus	40.77	40.07
Solyc10g084550.1.1	Tomato	plastid	40.24	39.49
Solyc08g066770.2.1	Tomato	cytosol	25.78	24.38
Solyc07g061760.1.1	Tomato	cytosol	10.28	22.01
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	18.47	20.5
Solyc07g061750.2.1	Tomato	cytosol	19.51	19.31

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:K4DHE0	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF8	SMART:SM00248	SUPFAM:SSF48403
EnsemblPlantsGene:Solyc12g096670.1	EnsemblPlants:Solyc12g096670.1.1	TMHMM:TMhelix	UniParc:UPI0002769D4F	SEG:seg	:

Description

No Description!

Coordinates

chr12:-:65500982..65504281

Molecular Weight (calculated)

63262.3 Da

IEP (calculated)

10.011

GRAVY (calculated)

-0.064

Length

574 amino acids

Sequence
(BLAST)

001: MEKQVSFQGA KMEKQQSFQN GAMEKQKSFI GIMEKQKSFR IAMERQMSFG GERKRGKDSP GKRGDSPLHL AARAGNLGKV KEIIQKFDEK GIKDLLCQQN
101: QEGETALYVA AENGHSLVVA EFLKHLDLEI ASIVANNGYD TLHVAARQGH LDVLQELLHS FPNLVMTTDS SNSTALHTAA AQGHIHVVNM LLEIDSNLAK
201: IARNNGKTVL HTAARMGHLE IVRSLLSKDP EIGFRTDKKG QTALHMAAKG QNVDIVLELI KPNPAVLALE DNKGNTALHI ATRKGRIQMV QCLISIEGID
301: LNTLNKAGET VLEIAEKFGT PELVSILKEA GATHSKDHGK PAGPAKQLKQ TVSDIKHDVH SQLQQSRQTG FKVRKIAMKV KKLHISGLNN AINNATVVAV
401: LIATVAFAAI FTVPGQYVEK KTDGFSLGEA QIGRKAAFII FFLFDSMALF ISVAVVVVQT SVVVIEQKAK KRLMFWINKL MWAACLFISV AFISLSYVVV
501: GSKERWLAVY ATVVGCIIML TTIGSMCYCV VQHRLEESRL RSIRRTETNS RSFPMSVASD QELCSENYKR MYAV

Best Arabidopsis Sequence Match ( AT2G31820.1 )
(BLAST)

001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.