Factsheet for Solyc06g075600.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078144	Potato	cytosol	97.57	97.57
CDX93618	Canola	cytosol	40.0	74.31
KRH22984	Soybean	cytosol	75.51	74.13
KRH10329	Soybean	cytosol	74.58	73.21
Solyc11g072960.1.1	Tomato	cytosol	72.15	72.69
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	72.9	71.96
KRH25003	Soybean	cytosol, plastid	72.9	71.17
Bra018683.1-P	Field mustard	cytosol	71.4	70.87
KRG88671	Soybean	cytosol, plastid	72.15	70.31
CDX95126	Canola	cytosol	70.65	70.0
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	71.03	69.98
Solyc06g005240.2.1	Tomato	cytosol	57.76	68.67
CDY55069	Canola	cytosol, peroxisome, plasma membrane	30.65	68.33
GSMUA_Achr8P02120_001	Banana	cytosol	68.04	67.66
AT5G60070.1	Thale cress	cytosol, plastid	65.98	64.42
TraesCS4B01G202300.1	Wheat	cytosol	64.86	64.26
TraesCS4D01G203200.1	Wheat	cytosol	64.86	64.26
CDX88738	Canola	plastid	64.3	64.18
Bra006680.1-P	Field mustard	plastid	65.42	64.1
CDX71059	Canola	plastid	65.42	64.1
TraesCS4A01G102300.1	Wheat	cytosol	64.11	62.82
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	62.8	62.11
GSMUA_Achr6P33230_001	Banana	cytosol	68.6	61.89
Os03t0281100-00	Rice	cytosol	64.3	60.88
Zm00001d028680_P001	Maize	cytosol	63.55	60.5
EER95066	Sorghum	cytosol	62.24	58.73
GSMUA_Achr9P04150_001	Banana	plasma membrane	66.54	54.1
CDX99605	Canola	cytosol	27.66	51.93
CDY59983	Canola	cytosol	29.16	51.66
CDX73200	Canola	cytosol	28.97	51.32
Solyc12g019060.1.1	Tomato	cytosol	54.21	50.88
Solyc12g096670.1.1	Tomato	cytosol	53.46	49.83
Solyc08g014570.2.1	Tomato	cytosol, peroxisome, plasma membrane	52.15	49.64
HORVU4Hr1G058450.9	Barley	plastid	55.7	48.46
Solyc01g005340.2.1	Tomato	plasma membrane	43.55	44.55
Solyc05g054830.2.1	Tomato	nucleus	46.36	42.47
Solyc10g084550.1.1	Tomato	plastid	44.49	40.68
Solyc08g066770.2.1	Tomato	cytosol	25.98	22.9
Solyc07g061760.1.1	Tomato	cytosol	10.47	20.9
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	19.25	19.92
Solyc07g061750.2.1	Tomato	cytosol	18.69	17.24

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K4C9S5	PFAM:PF12796	PFAM:PF13857
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10
SMART:SM00248	SUPFAM:SSF48403	EnsemblPlantsGene:Solyc06g075600.2	EnsemblPlants:Solyc06g075600.2.1	TMHMM:TMhelix	UniParc:UPI0002766D40
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:46989596..46991593

Molecular Weight (calculated)

58612.7 Da

IEP (calculated)

10.029

GRAVY (calculated)

0.013

Length

535 amino acids

Sequence
(BLAST)

001: MEAPMPPKRM KKQLTGKRED SVLHRLARAG NLVEIKGIID YTGEKELTEL LVKQNSAGET SLYVAAEYGY CDLVKEMIKY YDLVAAGIKA RNGFDALHIA
101: AKQGDLDVVK VLMMVHPELS MTVDVANTTA LHSAANQGHI QMVNYLLEAE SSLATIAKSN GKTALHSAAR NGHVEVVKAL LNKEARMASR TDKKGQTALH
201: MAVKGQNLEV VEELIRADAK LINIVDTKGN TALHIASRKG RAQIVKFLLG QNETDTKAVN RSKETALDTA EKMGQANIAV ILQEAGVQSA RAIKPQTTNP
301: ARQLKQTVSD IKHEVHYQME HTRQTRKRIH GIAKRLDKMH AEGLNNAINS TTVVAVLIAT VAFAAIFSVP GQYIEYPEDV PPGHSLGEAN IAPSPSFLIF
401: LVFDSFALFI SLAVVVVQTS IVVIESKAKK QMMAIINKLM WLACVLISVA FLALSYVVVG KNEKWLAIVV TIIGTAILVT TLGTMCYWVI MHRIESSNKR
501: NIRKNSLASR SLSWSASVLS NSDVLNNKNN KMYAI

Best Arabidopsis Sequence Match ( AT1G07710.2 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.