CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88671	Soybean	cytosol, plastid	95.07	94.9
KRH10329	Soybean	cytosol	82.3	82.75
KRH22984	Soybean	cytosol	82.12	82.57
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	75.18	76.01
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	71.17	72.9
PGSC0003DMT400078144	Potato	cytosol	71.17	72.9
Solyc11g072960.1.1	Tomato	cytosol	68.8	71.0
GSMUA_Achr8P02120_001	Banana	cytosol	69.53	70.82
PGSC0003DMT400040191	Potato	cytosol	68.8	70.34
PGSC0003DMT400025094	Potato	cytosol	67.52	68.52
CDX88738	Canola	plastid	65.88	67.35
TraesCS4D01G203200.1	Wheat	cytosol	65.69	66.67
CDX71059	Canola	plastid	66.42	66.67
Bra006680.1-P	Field mustard	plastid	66.42	66.67
TraesCS4B01G202300.1	Wheat	cytosol	65.51	66.48
AT5G60070.1	Thale cress	cytosol, plastid	66.06	66.06
TraesCS4A01G102300.1	Wheat	cytosol	65.15	65.38
Solyc06g005240.2.1	Tomato	cytosol	53.65	65.33
KRH67582	Soybean	cytosol	61.86	65.07
Os03t0281100-00	Rice	cytosol	66.06	64.07
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	61.86	63.96
GSMUA_Achr6P33230_001	Banana	cytosol	68.98	63.74
Zm00001d028680_P001	Maize	cytosol	64.6	62.99
EER95066	Sorghum	cytosol	63.32	61.2
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	26.09	56.3
GSMUA_Achr9P04150_001	Banana	plasma membrane	67.52	56.23
KRG97307	Soybean	cytosol	54.2	53.23
KRH69034	Soybean	cytosol	54.74	53.0
HORVU4Hr1G058450.9	Barley	plastid	55.66	49.59
KRH64845	Soybean	cytosol	47.99	47.56
KRG92972	Soybean	cytosol	47.08	44.1
KRH60413	Soybean	cytosol	42.15	43.58
KRH36223	Soybean	cytosol	46.72	43.24
KRH41712	Soybean	cytosol	41.42	42.99
KRH49636	Soybean	cytosol	40.88	42.67
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	40.51	42.29
KRG95863	Soybean	cytosol, plastid	42.52	40.1
KRH67581	Soybean	cytosol, plastid	42.15	39.97
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	25.55	21.64
KRH55981	Soybean	cytosol	19.71	18.06
KRH25567	Soybean	plasma membrane	20.99	17.97
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	21.53	17.69
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	20.99	17.5
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	20.44	17.34
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	20.44	17.07
KRH42265	Soybean	cytosol	17.7	15.72
KRH55984	Soybean	cytosol	18.98	15.66
KRH55986	Soybean	cytosol	5.29	11.28
KRH55979	Soybean	mitochondrion, nucleus	4.38	10.91
KRH50654	Soybean	cytosol	4.38	10.39
KRH58386	Soybean	cytosol	18.61	9.89
KRH33072	Soybean	cytosol	3.83	9.05

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100808971	MapMan:35.1	EMBL:ACUP02007194	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620	EnsemblPlantsGene:GLYMA_12G074900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	UniProt:I1LR31	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	EnsemblPlants:KRH25003	ProteinID:KRH25003	ProteinID:KRH25003.1	PFAM:PF12796	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248
SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000233D732	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:-:5658150..5662813

Molecular Weight (calculated)

59138.9 Da

IEP (calculated)

10.088

GRAVY (calculated)

-0.004

Length

548 amino acids

Sequence
(BLAST)

001: MDTPNAQPQA ASASTPRKKM TKQLTGKRDD TPLHSAARAG NMTVLKDTVG GTEEGELRVL LTKQNHAGET VLYVAAEYGY VDMVRELIQY YDLAGAGIKA
101: RNGFDALHIA AKQGDLDIVK ILMEAHPELS MTVDPSNTTA VHTAALQGHT EIVKLLLEAG SNLATISRSN GKTALHSAAR NGHLEVVKAL LGKEPSVATR
201: TDKKGQTAIH MAVKGQSLEV VEELIKADPS TINMVDNKGN TALHIATRKG RARIVKLLLG QTETDALVVN RSGETALDTA EKTGNSEVKD ILLEHGVRRA
301: KAIKAQPGTA TARELKQTVS DIKHEVHYQL EHTRQTRRGV QGIAKRINKM HTEGLNNAIN STTVVAVLIA TVAFAAIFTV PGQFADEPKD IPAGSGMTIG
401: EANIAPQAAF LIFFVFDSIA LFISLAVVVV QTSVVIIESK AKKQMMAIIN KLMWLACVLI SVAFLALSFV VVGKDQKWLA IGVTIIGTTI MATTLGTMSY
501: WVIRHRIEAS NLRSIRKSSM GSRSRSFSVS VMSDSELLNN DRKILYAI

Best Arabidopsis Sequence Match ( AT1G07710.1 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.