Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- nucleus 1
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400040191 | Potato | cytosol | 97.36 | 96.46 |
Solyc06g075600.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 72.69 | 72.15 |
KRH10329 | Soybean | cytosol | 72.69 | 70.83 |
KRH22984 | Soybean | cytosol | 72.13 | 70.28 |
Solyc06g005240.2.1 | Tomato | cytosol | 59.32 | 70.0 |
VIT_06s0004g03980.t01 | Wine grape | cytosol, nucleus, plasma membrane | 70.24 | 68.82 |
KRH25003 | Soybean | cytosol, plastid | 71.0 | 68.8 |
KRG88671 | Soybean | cytosol, plastid | 70.81 | 68.49 |
Bra018683.1-P | Field mustard | cytosol | 66.48 | 65.49 |
CDX95126 | Canola | cytosol | 66.1 | 65.0 |
AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 66.29 | 64.83 |
CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 29.0 | 64.17 |
TraesCS4B01G202300.1 | Wheat | cytosol | 65.16 | 64.07 |
GSMUA_Achr8P02120_001 | Banana | cytosol | 64.78 | 63.94 |
TraesCS4D01G203200.1 | Wheat | cytosol | 64.97 | 63.89 |
CDX93618 | Canola | cytosol | 34.46 | 63.54 |
TraesCS4A01G102300.1 | Wheat | cytosol | 64.6 | 62.82 |
CDX88738 | Canola | plastid | 63.28 | 62.69 |
CDX71059 | Canola | plastid | 64.03 | 62.27 |
Bra006680.1-P | Field mustard | plastid | 64.03 | 62.27 |
AT5G60070.1 | Thale cress | cytosol, plastid | 62.52 | 60.58 |
Os03t0281100-00 | Rice | cytosol | 63.84 | 60.0 |
Zm00001d028680_P001 | Maize | cytosol | 63.09 | 59.61 |
GSMUA_Achr6P33230_001 | Banana | cytosol | 64.97 | 58.18 |
EER95066 | Sorghum | cytosol | 61.96 | 58.02 |
Solyc09g005860.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 58.76 | 57.67 |
GSMUA_Achr9P04150_001 | Banana | plasma membrane | 63.09 | 50.91 |
CDX99605 | Canola | cytosol | 26.37 | 49.12 |
CDY59983 | Canola | cytosol | 27.87 | 49.01 |
CDX73200 | Canola | cytosol | 27.68 | 48.68 |
Solyc12g096670.1.1 | Tomato | cytosol | 51.98 | 48.08 |
Solyc12g019060.1.1 | Tomato | cytosol | 51.6 | 48.07 |
Solyc08g014570.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 50.47 | 47.69 |
HORVU4Hr1G058450.9 | Barley | plastid | 53.3 | 46.02 |
Solyc01g005340.2.1 | Tomato | plasma membrane | 43.5 | 44.17 |
Solyc05g054830.2.1 | Tomato | nucleus | 44.44 | 40.41 |
Solyc10g084550.1.1 | Tomato | plastid | 43.5 | 39.49 |
Solyc07g061760.1.1 | Tomato | cytosol | 11.11 | 22.01 |
Solyc08g066770.2.1 | Tomato | cytosol | 24.86 | 21.75 |
Solyc07g061740.2.1 | Tomato | mitochondrion, plasma membrane | 19.21 | 19.73 |
Solyc07g061750.2.1 | Tomato | cytosol | 20.53 | 18.79 |
Protein Annotations
Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:At2g01680/At5g02620 |
ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
GO:GO:0016021 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | UniProt:K4DB02 | PFAM:PF12796 |
PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24186 | PANTHER:PTHR24186:SF10 |
SMART:SM00248 | SUPFAM:SSF48403 | EnsemblPlantsGene:Solyc11g072960.1 | EnsemblPlants:Solyc11g072960.1.1 | TMHMM:TMhelix | UniParc:UPI0002769FC2 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:56110373..56112770
Molecular Weight (calculated)
58368.7 Da
IEP (calculated)
8.386
GRAVY (calculated)
-0.063
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: METPAAQPTT PRKKMTKQLT GKRDDSALHS AARAGNLVAI KNTIEETDEE ELAELLIKQN SAGETPLYVA AEYGYYEVVR EMIMYYDLVA AGIKARNGFD
101: ALHIAAKQGD LDVVKVLMEA HPELAMTVDV VNTTALHTAA NQGHLEMVNY LLEEQSSLAT IAKSNGKTAL HSSARNGHLQ VLKALLSKEP GIATRMDNKG
201: QTALHMAVKG QNLEVVEELT NADPSLLNMV DNKGNTPLHI ASRKGRAEVV KLLLSQNETD TEVINRSHET ALDTAEKMSQ ADTVAILQEY GVQSARVLKP
301: QATNPARELK QTVSDIKHEV HDQLKHTKQT RRRIQGIAKR LHKMHREGLN NAINSTTVVA VLIATVAFAG IFQVPGQYYM DPTNLPAGHI IGEANISNHP
401: GFLVFFVFDS IALFISLAVV VVQTTVVAIE SKAKKKLMAI INKLMWVACV FVSVAYLALS FVVVGTRYWV MAVIVTVLGA TIMASTIGVM LYWVIKHRIE
501: SSNKKSMRRN SMEYSDSALS DDNNEFKIYA L
101: ALHIAAKQGD LDVVKVLMEA HPELAMTVDV VNTTALHTAA NQGHLEMVNY LLEEQSSLAT IAKSNGKTAL HSSARNGHLQ VLKALLSKEP GIATRMDNKG
201: QTALHMAVKG QNLEVVEELT NADPSLLNMV DNKGNTPLHI ASRKGRAEVV KLLLSQNETD TEVINRSHET ALDTAEKMSQ ADTVAILQEY GVQSARVLKP
301: QATNPARELK QTVSDIKHEV HDQLKHTKQT RRRIQGIAKR LHKMHREGLN NAINSTTVVA VLIATVAFAG IFQVPGQYYM DPTNLPAGHI IGEANISNHP
401: GFLVFFVFDS IALFISLAVV VVQTTVVAIE SKAKKKLMAI INKLMWVACV FVSVAYLALS FVVVGTRYWV MAVIVTVLGA TIMASTIGVM LYWVIKHRIE
501: SSNKKSMRRN SMEYSDSALS DDNNEFKIYA L
001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.