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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400040191 Potato cytosol 97.36 96.46
Solyc06g075600.2.1 Tomato cytosol, peroxisome, plasma membrane 72.69 72.15
KRH10329 Soybean cytosol 72.69 70.83
KRH22984 Soybean cytosol 72.13 70.28
Solyc06g005240.2.1 Tomato cytosol 59.32 70.0
VIT_06s0004g03980.t01 Wine grape cytosol, nucleus, plasma membrane 70.24 68.82
KRH25003 Soybean cytosol, plastid 71.0 68.8
KRG88671 Soybean cytosol, plastid 70.81 68.49
Bra018683.1-P Field mustard cytosol 66.48 65.49
CDX95126 Canola cytosol 66.1 65.0
AT1G07710.1 Thale cress cytosol, peroxisome, plasma membrane 66.29 64.83
CDY55069 Canola cytosol, peroxisome, plasma membrane 29.0 64.17
TraesCS4B01G202300.1 Wheat cytosol 65.16 64.07
GSMUA_Achr8P02120_001 Banana cytosol 64.78 63.94
TraesCS4D01G203200.1 Wheat cytosol 64.97 63.89
CDX93618 Canola cytosol 34.46 63.54
TraesCS4A01G102300.1 Wheat cytosol 64.6 62.82
CDX88738 Canola plastid 63.28 62.69
CDX71059 Canola plastid 64.03 62.27
Bra006680.1-P Field mustard plastid 64.03 62.27
AT5G60070.1 Thale cress cytosol, plastid 62.52 60.58
Os03t0281100-00 Rice cytosol 63.84 60.0
Zm00001d028680_P001 Maize cytosol 63.09 59.61
GSMUA_Achr6P33230_001 Banana cytosol 64.97 58.18
EER95066 Sorghum cytosol 61.96 58.02
Solyc09g005860.2.1 Tomato cytosol, peroxisome, plasma membrane 58.76 57.67
GSMUA_Achr9P04150_001 Banana plasma membrane 63.09 50.91
CDX99605 Canola cytosol 26.37 49.12
CDY59983 Canola cytosol 27.87 49.01
CDX73200 Canola cytosol 27.68 48.68
Solyc12g096670.1.1 Tomato cytosol 51.98 48.08
Solyc12g019060.1.1 Tomato cytosol 51.6 48.07
Solyc08g014570.2.1 Tomato cytosol, peroxisome, plasma membrane 50.47 47.69
HORVU4Hr1G058450.9 Barley plastid 53.3 46.02
Solyc01g005340.2.1 Tomato plasma membrane 43.5 44.17
Solyc05g054830.2.1 Tomato nucleus 44.44 40.41
Solyc10g084550.1.1 Tomato plastid 43.5 39.49
Solyc07g061760.1.1 Tomato cytosol 11.11 22.01
Solyc08g066770.2.1 Tomato cytosol 24.86 21.75
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 19.21 19.73
Solyc07g061750.2.1 Tomato cytosol 20.53 18.79
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfInterPro:At2g01680/At5g02620
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770UniProt:K4DB02PFAM:PF12796
PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24186PANTHER:PTHR24186:SF10
SMART:SM00248SUPFAM:SSF48403EnsemblPlantsGene:Solyc11g072960.1EnsemblPlants:Solyc11g072960.1.1TMHMM:TMhelixUniParc:UPI0002769FC2
SEG:seg:::::
Description
No Description!
Coordinates
chr11:-:56110373..56112770
Molecular Weight (calculated)
58368.7 Da
IEP (calculated)
8.386
GRAVY (calculated)
-0.063
Length
531 amino acids
Sequence
(BLAST)
001: METPAAQPTT PRKKMTKQLT GKRDDSALHS AARAGNLVAI KNTIEETDEE ELAELLIKQN SAGETPLYVA AEYGYYEVVR EMIMYYDLVA AGIKARNGFD
101: ALHIAAKQGD LDVVKVLMEA HPELAMTVDV VNTTALHTAA NQGHLEMVNY LLEEQSSLAT IAKSNGKTAL HSSARNGHLQ VLKALLSKEP GIATRMDNKG
201: QTALHMAVKG QNLEVVEELT NADPSLLNMV DNKGNTPLHI ASRKGRAEVV KLLLSQNETD TEVINRSHET ALDTAEKMSQ ADTVAILQEY GVQSARVLKP
301: QATNPARELK QTVSDIKHEV HDQLKHTKQT RRRIQGIAKR LHKMHREGLN NAINSTTVVA VLIATVAFAG IFQVPGQYYM DPTNLPAGHI IGEANISNHP
401: GFLVFFVFDS IALFISLAVV VVQTTVVAIE SKAKKKLMAI INKLMWVACV FVSVAYLALS FVVVGTRYWV MAVIVTVLGA TIMASTIGVM LYWVIKHRIE
501: SSNKKSMRRN SMEYSDSALS DDNNEFKIYA L
Best Arabidopsis Sequence Match ( AT1G07710.2 )
(BLAST)
001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.