Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59983 | Canola | cytosol | 97.35 | 97.35 |
| CDX99605 | Canola | cytosol | 91.06 | 96.49 |
| CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 66.23 | 83.33 |
| CDX93618 | Canola | cytosol | 61.92 | 64.93 |
| CDX95126 | Canola | cytosol | 66.23 | 37.04 |
| Bra018683.1-P | Field mustard | cytosol | 65.56 | 36.73 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 64.57 | 35.91 |
| PGSC0003DMT400078144 | Potato | cytosol | 51.99 | 29.35 |
| Solyc06g075600.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 51.32 | 28.97 |
| CDX71059 | Canola | plastid | 51.99 | 28.75 |
| CDX88738 | Canola | plastid | 49.67 | 27.99 |
| TraesCS4B01G202300.1 | Wheat | cytosol | 50.0 | 27.96 |
| TraesCS4D01G203200.1 | Wheat | cytosol | 49.67 | 27.78 |
| Solyc11g072960.1.1 | Tomato | cytosol | 48.68 | 27.68 |
| TraesCS4A01G102300.1 | Wheat | cytosol | 49.67 | 27.47 |
| PGSC0003DMT400040191 | Potato | cytosol | 48.34 | 27.24 |
| GSMUA_Achr8P02120_001 | Banana | cytosol | 48.34 | 27.14 |
| Solyc06g005240.2.1 | Tomato | cytosol | 38.74 | 26.0 |
| Os03t0281100-00 | Rice | cytosol | 48.34 | 25.84 |
| CDY10435 | Canola | cytosol | 44.7 | 25.62 |
| CDY70132 | Canola | cytosol | 44.37 | 25.43 |
| PGSC0003DMT400025094 | Potato | cytosol | 45.03 | 25.19 |
| GSMUA_Achr6P33230_001 | Banana | cytosol | 49.34 | 25.13 |
| Zm00001d028680_P001 | Maize | cytosol | 46.36 | 24.91 |
| EER95066 | Sorghum | cytosol | 46.03 | 24.52 |
| HORVU4Hr1G058450.9 | Barley | plastid | 49.34 | 24.23 |
| CDY58363 | Canola | cytosol | 43.71 | 23.74 |
| CDY15549 | Canola | cytosol | 43.71 | 23.66 |
| CDX86566 | Canola | cytosol | 43.71 | 22.88 |
| GSMUA_Achr9P04150_001 | Banana | plasma membrane | 48.68 | 22.34 |
| CDY19113 | Canola | cytosol | 44.04 | 21.08 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 42.72 | 20.74 |
| CDY17652 | Canola | cytosol | 34.77 | 19.7 |
| CDY36249 | Canola | cytosol | 34.77 | 19.63 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 39.74 | 19.14 |
| CDY42145 | Canola | cytosol | 34.44 | 17.78 |
| CDY07932 | Canola | nucleus, plastid | 34.77 | 17.53 |
| CDY50551 | Canola | cytosol | 34.11 | 17.49 |
| CDY50335 | Canola | cytosol | 34.11 | 17.49 |
| CDX73985 | Canola | nucleus | 34.77 | 17.24 |
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 8.61 | 16.77 |
| CDY08436 | Canola | cytosol | 34.11 | 15.61 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 15.89 | 10.48 |
| CDY20943 | Canola | cytosol | 19.21 | 10.09 |
| CDY39673 | Canola | plasma membrane | 19.21 | 9.67 |
| CDY48208 | Canola | cytosol | 19.87 | 9.63 |
| CDY69308 | Canola | plasma membrane | 18.21 | 9.27 |
| CDY20635 | Canola | plasma membrane | 17.88 | 9.26 |
| CDY35767 | Canola | cytosol, peroxisome, plasma membrane | 18.54 | 9.15 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 16.89 | 9.03 |
| CDY40662 | Canola | plasma membrane | 16.89 | 8.84 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 16.89 | 8.82 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 17.22 | 8.81 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 16.56 | 8.67 |
| CDY58683 | Canola | cytosol | 7.95 | 7.87 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 14.57 | 7.8 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 16.23 | 7.57 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 16.56 | 7.08 |
| CDY21967 | Canola | plasma membrane | 15.56 | 6.23 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 12.91 | 5.51 |
| CDY45914 | Canola | cytosol | 7.95 | 5.47 |
| CDY20642 | Canola | nucleus | 19.54 | 4.13 |
| CDY58682 | Canola | cytosol | 0.0 | 0.0 |
| CDY16446 | Canola | cytosol | 0.0 | 0.0 |
| CDY21969 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | GO:A0A078C8R8 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| InterPro:At2g01680/At5g02620 | EnsemblPlants:CDX73200 | ProteinID:CDX73200 | ProteinID:CDX73200.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00103693001 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF12796 |
| PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24186 | PANTHER:PTHR24186:SF10 |
| SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI0004EE9A65 | SEG:seg | : |
Description
BnaC06g36480D
Coordinates
chrLK031797:-:2651898..2653503
Molecular Weight (calculated)
33060.0 Da
IEP (calculated)
9.315
GRAVY (calculated)
-0.045
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKGQTALH MAAKGTNVEV VEELIKADRS SINIADTKGN TALHIATRKG RSHIVKLLLD NNITDTKTTR RRVQGIAKQL NKMHTEGLNN AINSTTVVAV
101: LIATVAFAAI LTVPGQYVED TSNLPDGHSL GEANIASTTP FIIFFIFDFI ALFISLAAVV VQTSVVVIES KAKKQMMAVI NKLACVLMRS HLRFEEDLNL
201: SKMVLMLKII TSPYMLNEFD VSSYPKVGSN TFYPDFSHRF EEQEGCVLVT ESSSVDSTSN VKAPVKREGS PIERIEPAFY QSSANNHGPS VTIKKAKTEK
301: SG
101: LIATVAFAAI LTVPGQYVED TSNLPDGHSL GEANIASTTP FIIFFIFDFI ALFISLAAVV VQTSVVVIES KAKKQMMAVI NKLACVLMRS HLRFEEDLNL
201: SKMVLMLKII TSPYMLNEFD VSSYPKVGSN TFYPDFSHRF EEQEGCVLVT ESSSVDSTSN VKAPVKREGS PIERIEPAFY QSSANNHGPS VTIKKAKTEK
301: SG
001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.