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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034209.1-P Field mustard cytosol 78.68 95.19
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 65.03 69.15
CDY18182 Canola cytosol, peroxisome, plasma membrane 33.91 45.39
VIT_12s0059g00130.t01 Wine grape cytosol 20.13 39.9
VIT_12s0059g00150.t01 Wine grape cytosol 19.07 37.21
VIT_12s0059g00090.t01 Wine grape cytosol 17.62 37.05
CDY48208 Canola cytosol 30.33 36.76
VIT_12s0059g00110.t01 Wine grape cytosol 18.81 36.69
VIT_12s0028g04020.t01 Wine grape plasma membrane 15.36 36.48
CDY35767 Canola cytosol, peroxisome, plasma membrane 29.4 36.27
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 26.62 34.54
CDY45914 Canola cytosol 20.0 34.4
VIT_12s0059g00060.t01 Wine grape cytosol 23.05 33.85
CDY45915 Canola extracellular, plasma membrane, plastid, vacuole 6.89 33.55
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 29.54 33.48
VIT_12s0028g03960.t01 Wine grape plasma membrane 18.15 32.93
VIT_12s0059g00050.t01 Wine grape plasma membrane 26.09 30.45
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 26.09 29.54
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 26.36 29.39
CDY48209 Canola cytosol, peroxisome, plasma membrane 27.02 28.9
VIT_12s0028g03990.t01 Wine grape cytosol 22.25 28.33
CDY58683 Canola cytosol 11.26 27.87
CDY21969 Canola nucleus 12.32 27.76
CDY42176 Canola cytosol, peroxisome, plasma membrane 23.58 27.51
VIT_12s0028g04010.t01 Wine grape cytosol 16.16 27.23
CDY48563 Canola cytosol, nucleus, plasma membrane, plastid 25.43 27.12
KRH25558 Soybean cytosol, peroxisome, plasma membrane, plastid 22.25 26.01
KRH25567 Soybean plasma membrane 21.85 25.78
KRH55981 Soybean cytosol 20.13 25.42
CDY16445 Canola cytosol, plasma membrane, plastid 18.94 25.31
KRH55987 Soybean cytosol, peroxisome, plasma membrane 21.59 24.44
KRH25555 Soybean cytosol, peroxisome, plasma membrane 20.79 23.9
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 25.56 23.45
CDY58682 Canola cytosol 2.52 22.62
KRH55986 Soybean cytosol 7.68 22.57
KRH55978 Soybean cytosol, peroxisome, plasma membrane 19.47 22.41
CDX93618 Canola cytosol 8.48 22.22
CDY55069 Canola cytosol, peroxisome, plasma membrane 7.02 22.08
KRH55984 Soybean cytosol 19.21 21.84
CDY40662 Canola plasma membrane 16.69 21.84
CDY40658 Canola cytosol, peroxisome, plasma membrane 16.69 21.84
KRH55979 Soybean mitochondrion, nucleus 6.36 21.82
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 25.43 21.67
CDX74181 Canola cytosol, peroxisome, plasma membrane 16.42 21.45
CDY16446 Canola cytosol 0.4 21.43
CDY30009 Canola cytosol, plasma membrane, plastid 16.42 21.02
CDX88738 Canola plastid 14.83 20.9
CDX71059 Canola plastid 14.83 20.51
CDX95126 Canola cytosol 14.44 20.19
CDY70132 Canola cytosol 14.04 20.11
CDY10435 Canola cytosol 14.04 20.11
CDY58363 Canola cytosol 14.3 19.42
VIT_12s0059g00120.t01 Wine grape cytosol 21.19 19.39
CDY15549 Canola cytosol 13.91 18.82
CDY42071 Canola cytosol, nucleus, plasma membrane, plastid 14.83 18.01
CDY19113 Canola cytosol 14.83 17.75
CDY34515 Canola cytosol, nucleus, plasma membrane, plastid 14.17 17.07
CDY50335 Canola cytosol 13.24 16.98
CDY50551 Canola cytosol 13.11 16.81
CDY42145 Canola cytosol 12.98 16.75
CDX86566 Canola cytosol 12.58 16.46
CDY36249 Canola cytosol 11.66 16.45
CDY07932 Canola nucleus, plastid 12.98 16.36
CDX99605 Canola cytosol 6.09 16.14
CDY17652 Canola cytosol 11.39 16.14
CDX73985 Canola nucleus 12.98 16.09
CDY20943 Canola cytosol 12.05 15.83
CDX73200 Canola cytosol 6.23 15.56
CDY20639 Canola cytosol, peroxisome, plasma membrane 9.27 15.28
CDY20635 Canola plasma membrane 11.79 15.27
CDY69308 Canola plasma membrane 11.92 15.18
CDY59983 Canola cytosol 5.96 14.9
CDY08436 Canola cytosol 12.98 14.85
CDY39673 Canola plasma membrane 11.52 14.5
CDY20642 Canola nucleus 9.14 4.84
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1GO:A0A078GAD4UniProt:A0A078GAD4InterPro:ACD6InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfEnsemblPlants:CDY21967ProteinID:CDY21967ProteinID:CDY21967.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0006950GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009719GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0031347
GO:GO:0071446GO:GO:2000031EnsemblPlantsGene:GSBRNA2T00018302001InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770
PFAM:PF00023PFAM:PF12796PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24177PANTHER:PTHR24177:SF109SMART:SM00248SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0004EF12E5
SEG:seg:::::
Description
BnaC09g00730DBnaC09g00730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAD4]
Coordinates
chrLK032126:-:416445..421309
Molecular Weight (calculated)
83054.0 Da
IEP (calculated)
6.928
GRAVY (calculated)
0.148
Length
755 amino acids
Sequence
(BLAST)
001: MEGDTDGVII LLHISKTINT ADVQEKDNKT NRSTCWAFDF PQRYICDLHL PNALSSSPSR SPTYIPGIPA AFGAYFVLFV LLVDDDHHEH ASTAKISSEE
101: ASAAKSSSEE ASAAKISATA KKVLKRKAVV MGKVQDLEKI LQENEIPVLD QVTFQGNTIL HLAAIYGHDH LVRRILDHEL NVLRSWNPNI VGNFAPSFSH
201: YQTLLVRQNS EGNLALHVAA AAGHELIVDY LVESLRRLPQ DRNIVVRSEQ ILVGNIFSVS NNDGFTALHL ALKGNHVAVS LQLVREDQST CFLLDKEGVS
301: PLYMAAEAGH VSLVEHMLHG LNASFVGKSV VCAALKSKDL DVLRAILESD SDLVDSRDEY GRTPLAFAAS IGYDIGVEHM LTRFGSSTQI AYIKSEDGSF
401: PIHSACAASR KTRNAALKVI LKHHPDTIEM LNSQGQNVLH VAAENGNAGA VGYLLRKADV KRLINEQDLE GNTPLHLASI NSHPKVVSLF IHDSRVELKV
501: LNHKGFTTLD AAEEYMAAIP SLQQMIGPSP DISWKWLIWV ALVSAGTTRA PRVHLKADSP TTEEDFTLKM YKDRVNTLLV VATLVATMAF AAGLSVPLGY
601: NSTEFKSNVK HSYKESAFNA FVICNSIAVY SAVISTVALI GTQLADMKCM LTTFKFIVPL LGFSIISMSL AFVAGLYLVL GQHHWLAVFV LASGGFYLMA
701: LLLLIIPYAS PYTFSPLVFR YFLRFPFSML VFFVYWRDGT DGECSSRVFR WSFIG
Best Arabidopsis Sequence Match ( AT4G03490.4 )
(BLAST)
001: MDPETYRAVV MGKVQEFEKV MEENEIPVLD QVTFQGNTIL HLAAIYGHDH LVRRILAYEL NILRNWKRGL NCNFVPSFSH YQTLLVRRNY KGDLALHVAA
101: AAGHKLIVGL LIDCLRQLPQ DITMVIGSEQ MVIGNIFRVS NNDGNTALHL SLKGNHVSVS LQLVREDRST CFLLDKEDVS PLYMAAEAGY VSLVEHMLRG
201: LDASFVGKSV LCAAVKSQNL DILTAVLESD SDLVESRDED GRTPLATAAS IGYDIGVQHM LTRFASSTQV AYIKNEDGSF PIHSACSARC TSALKVILKH
301: HPDTIEMLNS QGQNVLHVAA KSGNARAVGY LLRKSDVKRL INEQDIEGNT PLHLASSNSH PKVVSLFIHD RRVDLKILNY KGFTALDAAE DHMATIPSLQ
401: EWLIWMALVA AGTTRAPRVH LRADIPGLTT DEDLILKIHK DRVNTLLVVA TLVATMAFAA GLSVPLGYNS TEFKSNVKHS YEESAFHAFV ICNSIAVYTA
501: VISTVALIGT QLADLKCMLT TFKFIVPLLG FSIIAMSLAF VAGLYLVLGH HYWLAIFVLA SGGFYLMALL LLIIPYASPY TFSPLFFRYF LRFPFSMLVS
601: FAYWRDGTDG ECSSRVFRWS FLG
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G03490]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.