CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55986	Soybean	cytosol	69.55	59.53
KRH50654	Soybean	cytosol	40.0	38.1
KRH33072	Soybean	cytosol	34.09	32.33
KRH25567	Soybean	plasma membrane	49.09	16.88
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	47.27	16.1
KRH55981	Soybean	cytosol	43.18	15.89
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	46.36	15.53
CDY21969	Canola	nucleus	23.64	15.52
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	46.82	15.44
KRH55984	Soybean	cytosol	45.91	15.21
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	41.36	13.87
VIT_12s0028g04010.t01	Wine grape	cytosol	21.82	10.71
VIT_12s0059g00060.t01	Wine grape	cytosol	22.73	9.73
AT1G03670.1	Thale cress	cytosol, peroxisome, plasma membrane	25.0	8.93
Bra033416.1-P	Field mustard	cytosol	21.82	8.56
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	22.27	8.42
CDY58682	Canola	cytosol	3.18	8.33
KRH42265	Soybean	cytosol	23.18	8.27
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.55	8.11
AT4G03480.1	Thale cress	mitochondrion	24.09	8.04
AT4G05040.1	Thale cress	cytosol	20.0	7.69
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	23.18	7.65
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	24.55	7.63
Bra034209.1-P	Field mustard	cytosol	21.36	7.53
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	24.55	7.53
AT4G03440.1	Thale cress	cytosol	25.45	7.46
CDY48209	Canola	cytosol, peroxisome, plasma membrane	23.18	7.22
CDY42176	Canola	cytosol, peroxisome, plasma membrane	20.91	7.11
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	22.73	7.09
AT4G03490.3	Thale cress	cytosol, peroxisome, plasma membrane	22.73	7.04
CDY48208	Canola	cytosol	19.55	6.9
AT4G14400.1	Thale cress	cytosol, nucleus, peroxisome	20.91	6.87
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.09	6.86
VIT_12s0059g00050.t01	Wine grape	plasma membrane	20.0	6.8
VIT_12s0028g03990.t01	Wine grape	cytosol	18.18	6.75
CDY35767	Canola	cytosol, peroxisome, plasma membrane	18.64	6.7
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	20.45	6.65
AT4G03460.1	Thale cress	peroxisome	18.64	6.53
AT4G14390.1	Thale cress	plasma membrane	20.45	6.48
AT4G03470.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	20.0	6.44
AT4G03500.1	Thale cress	cytosol, peroxisome, plasma membrane	19.09	6.44
CDY21967	Canola	plasma membrane	21.82	6.36
AT4G03450.1	Thale cress	plasma membrane	18.18	6.24
VIT_12s0059g00120.t01	Wine grape	cytosol	21.82	5.82
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	20.45	5.47
CDY18182	Canola	cytosol, peroxisome, plasma membrane	13.64	5.32
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	20.45	5.08
KRG92972	Soybean	cytosol	13.18	4.96
KRH36223	Soybean	cytosol	13.18	4.9
KRH58386	Soybean	cytosol	22.73	4.85
KRH67581	Soybean	cytosol, plastid	12.73	4.84
KRH10329	Soybean	cytosol	11.82	4.77
KRH64845	Soybean	cytosol	11.82	4.7
KRG97307	Soybean	cytosol	11.82	4.66
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	13.64	4.64
CDY58683	Canola	cytosol	6.36	4.59
KRH22984	Soybean	cytosol	11.36	4.59
KRH49636	Soybean	cytosol	10.91	4.57
KRH69034	Soybean	cytosol	11.36	4.42
KRH25003	Soybean	cytosol, plastid	10.91	4.38
KRG88671	Soybean	cytosol, plastid	10.91	4.37
KRG95863	Soybean	cytosol, plastid	10.91	4.13
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	9.55	4.0
KRH67582	Soybean	cytosol	9.09	3.84
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	9.09	3.77
CDY16445	Canola	cytosol, plasma membrane, plastid	9.55	3.72
KRH60413	Soybean	cytosol	8.64	3.58
KRH41712	Soybean	cytosol	8.18	3.41
Bra000823.1-P	Field mustard	plasma membrane	5.91	2.93
VIT_12s0059g00110.t01	Wine grape	cytosol	2.73	1.55
VIT_12s0059g00130.t01	Wine grape	cytosol	1.82	1.05
VIT_12s0059g00150.t01	Wine grape	cytosol	1.82	1.03
VIT_12s0028g03960.t01	Wine grape	plasma membrane	1.82	0.96
VIT_12s0028g04020.t01	Wine grape	plasma membrane	1.36	0.94
VIT_12s0059g00090.t01	Wine grape	cytosol	0.45	0.28
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	UniProt:A0A0R0JUP5	InterPro:ACD6	EMBL:ACUP02004075	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_06G294000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0031347	GO:GO:0071446	GO:GO:2000031
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH55979	ProteinID:KRH55979	ProteinID:KRH55979.1
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF109	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI0006EDB1D2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:48293111..48296667

Molecular Weight (calculated)

25104.0 Da

IEP (calculated)

9.593

GRAVY (calculated)

-0.740

Length

220 amino acids

Sequence
(BLAST)

001: MLKRKDVPQW IRRSPQTRSP QCGCSHGSAG DFDTRRKKKN DRVQAQGERR RTIGFKRAAN LGKEKIVELI CDHFPELLLR RNVKSDTVLD AAVRSKNSTI
101: DQVHSLQLSH REDKEITKEK NEYGDTPLHE AVYSDGDVGV IKEILLVDND VVYYLNKSRQ SPQYLAVLRG NKEILNRLLE ILVPADKPLP QQFIGNSPLH
201: AAVQKQDPDL IQHIIEKDPS

Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)

001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.