CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95863	Soybean	cytosol, plastid	93.43	92.94
KRG92972	Soybean	cytosol	68.34	67.52
KRH36223	Soybean	cytosol	68.86	67.23
KRH22984	Soybean	cytosol	40.14	42.57
KRH10329	Soybean	cytosol	39.97	42.39
KRH25003	Soybean	cytosol, plastid	39.97	42.15
KRG88671	Soybean	cytosol, plastid	39.97	42.08
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	37.37	40.75
KRH67582	Soybean	cytosol	36.51	40.5
KRH49636	Soybean	cytosol	36.51	40.19
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	17.47	39.76
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	35.81	39.43
KRH41712	Soybean	cytosol	35.64	39.02
KRG97307	Soybean	cytosol	37.37	38.71
KRH60413	Soybean	cytosol	35.29	38.49
KRH69034	Soybean	cytosol	37.54	38.34
KRH64845	Soybean	cytosol	32.35	33.82
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	24.05	21.48
KRH55981	Soybean	cytosol	19.55	18.9
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	21.45	18.59
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	20.76	18.26
KRH25567	Soybean	plasma membrane	19.55	17.66
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	19.72	17.65
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	19.9	17.53
KRH55984	Soybean	cytosol	19.55	17.02
KRH42265	Soybean	cytosol	16.95	15.88
KRH50654	Soybean	cytosol	5.71	14.29
KRH33072	Soybean	cytosol	5.36	13.36
KRH55979	Soybean	mitochondrion, nucleus	4.84	12.73
KRH55986	Soybean	cytosol	5.54	12.45
KRH58386	Soybean	cytosol	17.99	10.09

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100801840	MapMan:35.1	EMBL:ACUP02002069	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_03G174400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	UniProt:I1JPF4	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
EnsemblPlants:KRH67581	ProteinID:KRH67581	ProteinID:KRH67581.1	PFAM:PF00023	PFAM:PF12796	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248
SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0002336F7B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:38820027..38823166

Molecular Weight (calculated)

63240.7 Da

IEP (calculated)

10.232

GRAVY (calculated)

-0.071

Length

578 amino acids

Sequence
(BLAST)

001: MDHHRHPHHT TPLSEPTTPT TPRPTLFLST SGKALLLSNS NKSLLLSNSS KRLDTPRKKY VKQVTGRHND TELHLAAQRG DAASVRQILA EIDSIMMGSF
101: EFDAEVASVR SAIFNEVNEL GETALFTAAE KGHLDVVKEL LPHTSHDALS SKNRSGFDTL HIAASKGHLA IVQALLDHDP GLIKTFAQSN ATPLISAATR
201: GHADVVEELL SRDPTQLEMT RSNGKNALHL AARQGHVSVV KILLRKDQQL ARRTDKKGQT ALHMAVKGVS CEVVKLILAA DAAIVMLPDK FGNTALHVAT
301: RKKRTEIVHE LLLLPDTNVN TLTRDHKTAL DLAEGLPISE EILEIKECLI RYGAVKANDL NQPRDELRKT MTQIKKDVYF QLEQARKTNK NVSGIANELR
401: KLHRAGINNA ANSVTVVAVL FAAVAFAAMF TVPGGDNDQG VAVMAHTASF KAFFISNAIA LFTSLSVVVV QITIVRGEIK AERRVVEVIN KMMWLASVCT
501: SVSFITASYI VVGRRSQWAA ILVTIVGAVV MGGVLGTMTY YVVKSKRSRR MRKFSKTGTQ LCRLSNSDDS EINPIYAI

Best Arabidopsis Sequence Match ( AT3G09550.2 )
(BLAST)

001: MKKKKRQPKK RIEEEKELEP GMEKGLATDP TSPTGSTVAD LSPTPTPRKT LVLSNSGKAL MVSNSSKSLG LSNSGKRFDP TGKKKYVKQV TGRHNDTELH
101: LAAQRGDLAS VKQILSDIDS QITGTITGAD FDDEVAQIMT SVVNEVNELG ETPLFTAAEK GNIDVVKELL PYTTIESLMQ KNLSGFDALH IACSQGHRSI
201: VQLLLEHEPQ LSKTVAQSNA TPLVSAATRG HSEVVNELLA KDSSLLEISR SNGKNALHLA ARQGHVDIVR TLLDKDPQLA RRTDKKGQTS LHMAVKGVSS
301: QVVRLLLRAD PAIVMLPDKF GNTVLHIATR KKRAEIVNEL LQLPDTNVNA LTRDHKTAYD IAEGLTHSEE TAEIKEILSR CGALKANELN QPRDELRKTV
401: TEIKKDVHTQ LEQTRKTNKN VDGIAKELRK LHRAGINNAT NSVTVVAVLF ATVAFAAIFT VPGGDDDHGV AVMVHATSFK IFFIFNAIAL FTSLAVVVVQ
501: ITLVRGETKT ERRVVEVINK LMWLASVCTT VAFISSSYIV VGRRNRYAAV VVTVIGTVTM TGILSIMTYY VVKSKRTRIV RKKEKKKSAR NGTSSWHHAN
601: PSETESEVNP IYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.