CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10329	Soybean	cytosol	97.06	97.06
KRH25003	Soybean	cytosol, plastid	82.57	82.12
KRG88671	Soybean	cytosol, plastid	82.2	81.6
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	77.98	78.41
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	74.13	75.51
PGSC0003DMT400078144	Potato	cytosol	73.76	75.14
GSMUA_Achr8P02120_001	Banana	cytosol	71.74	72.68
Solyc11g072960.1.1	Tomato	cytosol	70.28	72.13
PGSC0003DMT400040191	Potato	cytosol	70.83	72.01
TraesCS4D01G203200.1	Wheat	cytosol	68.07	68.7
TraesCS4B01G202300.1	Wheat	cytosol	68.07	68.7
PGSC0003DMT400025094	Potato	cytosol	68.07	68.7
AT5G60070.1	Thale cress	cytosol, plastid	68.81	68.43
CDX88738	Canola	plastid	66.97	68.1
CDX71059	Canola	plastid	68.07	67.95
Bra006680.1-P	Field mustard	plastid	68.07	67.95
TraesCS4A01G102300.1	Wheat	cytosol	66.97	66.85
GSMUA_Achr6P33230_001	Banana	cytosol	72.11	66.27
KRH67582	Soybean	cytosol	63.3	66.22
Os03t0281100-00	Rice	cytosol	67.71	65.31
Solyc06g005240.2.1	Tomato	cytosol	53.58	64.89
Zm00001d028680_P001	Maize	cytosol	66.79	64.77
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	62.94	64.72
EER95066	Sorghum	cytosol	65.5	62.96
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	27.16	58.27
GSMUA_Achr9P04150_001	Banana	plasma membrane	69.91	57.9
KRH69034	Soybean	cytosol	57.98	55.83
KRG97307	Soybean	cytosol	56.88	55.56
HORVU4Hr1G058450.9	Barley	plastid	57.61	51.06
KRH64845	Soybean	cytosol	51.01	50.27
KRH60413	Soybean	cytosol	42.75	43.96
KRH49636	Soybean	cytosol	42.2	43.81
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	42.02	43.62
KRG92972	Soybean	cytosol	46.79	43.59
KRH41712	Soybean	cytosol	42.02	43.37
KRH36223	Soybean	cytosol	46.42	42.74
KRH67581	Soybean	cytosol, plastid	42.57	40.14
KRG95863	Soybean	cytosol, plastid	42.57	39.93
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	24.95	21.02
KRH55981	Soybean	cytosol	21.47	19.57
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	22.02	18.29
KRH25567	Soybean	plasma membrane	21.47	18.28
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	21.65	18.27
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	22.2	18.14
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	21.28	17.66
KRH55984	Soybean	cytosol	20.37	16.72
KRH42265	Soybean	cytosol	17.8	15.72
KRH55986	Soybean	cytosol	5.69	12.06
KRH55979	Soybean	mitochondrion, nucleus	4.59	11.36
KRH50654	Soybean	cytosol	4.77	11.26
KRH33072	Soybean	cytosol	4.22	9.91
KRH58386	Soybean	cytosol	18.72	9.89

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100779230	MapMan:35.1	EMBL:ACUP02008450	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620	EnsemblPlantsGene:GLYMA_13G331500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
UniProt:K7M3A8	ProteinID:KRH22983.1	EnsemblPlants:KRH22984	ProteinID:KRH22984	ProteinID:KRH22984.1	ProteinID:KRH22985.1
PFAM:PF00023	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PRINTS:PR01415	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix
UniParc:UPI00023CF320	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:42599185..42602291

Molecular Weight (calculated)

59389.3 Da

IEP (calculated)

9.569

GRAVY (calculated)

-0.011

Length

545 amino acids

Sequence
(BLAST)

001: MATPAMQAVN TPRKKMTKQL TGKRDDTPLH SAARAGKLAV LKDIILGTDE TELHELLAKQ NQDGETPLYI AAEYGYVDVV REMIQYYDLV DAGIKARNGF
101: DALHIAAKQG DLDVLKILME GHPELSMTVD PSNTTALHTA AIQGHTEIVK FLLEAGSSLA TIARSNGKTA LHSAARNGHL EVVKALLEKE PGVATRTDKK
201: GQTALHMAVK GQKIEVVEEL IKADPSLINM LDSKGNTALH IATRKGRAQI VKLLLEQKEN VTSAVNRCGE TAVDTAEKTG NHEVQAILLE HGVQSARTIK
301: PPQGTTATTA RELKQTVSDI KHEVHHQLEH TRQTRKRVQG IAKRINKMHA EGLNNAINST TVVAVLIATV AFAAIFTVPG QFVDDPNNIP PGMSLGEANI
401: APQAPFIIFF VFDSIALFIS LAVVVVQTSV VVIESKAKKQ MMAVINKLMW LACVLISVAF LALSFVVVGK EEKWLAIGVT IIGTTIMATT LGTMCYWVIR
501: HRIEASNLRN IRKSSLQSKS KSFSVSAFSD SELLNSEYYK KMYAI

Best Arabidopsis Sequence Match ( AT1G07710.2 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.