CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92972	Soybean	cytosol	94.76	95.9
VIT_13s0067g03880.t01	Wine grape	cytosol	79.05	79.46
Bra038714.1-P	Field mustard	cytosol, plastid	76.18	78.16
AT3G12360.1	Thale cress	cytosol	77.87	78.14
CDY42145	Canola	cytosol	77.2	78.12
Bra034760.1-P	Field mustard	cytosol	76.86	77.78
CDY50335	Canola	cytosol	77.36	77.76
CDY50551	Canola	cytosol	76.69	77.08
GSMUA_Achr5P07190_001	Banana	cytosol	67.57	76.05
GSMUA_Achr9P04170_001	Banana	cytosol	65.37	75.88
GSMUA_Achr11P...	Banana	cytosol	62.5	75.36
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	69.76	74.01
GSMUA_Achr6P34410_001	Banana	cytosol	63.01	73.14
GSMUA_Achr6P33220_001	Banana	cytosol	66.05	71.48
CDY08436	Canola	cytosol	76.86	68.94
KRH67581	Soybean	cytosol, plastid	67.23	68.86
KRG95863	Soybean	cytosol, plastid	66.22	67.47
HORVU3Hr1G087050.1	Barley	cytosol	62.33	66.73
Os01t0837000-01	Rice	cytosol	62.67	66.73
TraesCS3A01G354800.1	Wheat	cytosol	62.33	66.49
TraesCS3B01G387800.2	Wheat	cytosol	62.16	66.43
Zm00001d042948_P001	Maize	cytosol	62.16	66.07
EES03848	Sorghum	cytosol	61.99	66.01
TraesCS3D01G348800.2	Wheat	cytosol	61.82	65.95
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	70.1	60.85
EER95067	Sorghum	cytosol, nucleus, plasma membrane	69.26	59.59
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	69.93	59.57
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	69.59	59.37
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	69.26	59.25
Zm00001d047772_P002	Maize	plastid	69.59	59.2
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	69.93	58.56
TraesCS4A01G102200.2	Wheat	nucleus	69.76	57.2
KRG88671	Soybean	cytosol, plastid	43.41	46.81
KRH25003	Soybean	cytosol, plastid	43.24	46.72
KRH22984	Soybean	cytosol	42.74	46.42
KRH10329	Soybean	cytosol	42.74	46.42
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	39.7	44.34
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	18.92	44.09
KRH67582	Soybean	cytosol	38.68	43.95
KRH69034	Soybean	cytosol	40.88	42.76
KRG97307	Soybean	cytosol	40.2	42.65
KRH49636	Soybean	cytosol	37.16	41.9
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	35.98	40.57
KRH60413	Soybean	cytosol	35.47	39.62
KRH41712	Soybean	cytosol	35.3	39.58
KRH64845	Soybean	cytosol	36.15	38.7
GSMUA_Achr9P03090_001	Banana	cytosol	49.32	34.89
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	24.83	22.72
KRH55981	Soybean	cytosol	19.59	19.4
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	21.45	19.33
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	20.95	19.2
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	21.62	19.19
KRH25567	Soybean	plasma membrane	20.1	18.59
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	20.27	18.29
KRH55984	Soybean	cytosol	19.43	17.32
KRH42265	Soybean	cytosol	17.4	16.69
KRH50654	Soybean	cytosol	5.74	14.72
KRH33072	Soybean	cytosol	5.41	13.79
KRH55986	Soybean	cytosol	5.74	13.23
KRH55979	Soybean	mitochondrion, nucleus	4.9	13.18
KRH58386	Soybean	cytosol	18.07	10.38

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100777929	MapMan:35.1	EMBL:ACUP02006721	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G291900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	UniProt:I1LFE8	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	EnsemblPlants:KRH36223	ProteinID:KRH36223	ProteinID:KRH36223.1	PFAM:PF12796	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248
SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000233D694	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:50978590..50982089

Molecular Weight (calculated)

64110.6 Da

IEP (calculated)

8.667

GRAVY (calculated)

-0.208

Length

592 amino acids

Sequence
(BLAST)

001: MASHSNQPGP GAEGLGEKDP PTSFQNPLSE ISPSPSPSSA PAPALVLSNS GKRIDQAGKK KYVKQVTGRH NDTELHLAAQ RGDVGAVRQI LEDVDSQIMG
101: TLSGDGDEDD LNAEIAEVRA CLANEENELG ETPLFTAAEK GHLDVVKELL NYSTAQTVSK KNRSGFDPLH IAASQGHHPI VQVLLDYDSG LSKTIGPSNS
201: TPLITAATRG HTEVVNELLS KDCSLLEIAR SNGKNALHLA ARQGHVEIVK ALLSKDPQLA RRTDKKGQTA LHMAVKGQSC DVVKLLLEAD AAIVMLPDKF
301: GNTALHVATR KKRVEIVNEL LHLPDTNVNA LTRDHKTALD IAEDLPLSEE ASDIKDCLSR YGALRANELN QPRDELRKTV TQIKKDVHTQ LEQTKRTNKN
401: VHNISKELRK LHREGINNAT NSVTVVAVLF ATVAFAAIFT VPGGDHNDGS AVVAAYAAFK IFFVFNAIAL FTSLAVVVVQ ITLVRGETKA EKRVVVVINK
501: LMWLASVCTS VTFIAASYIV VGKKNEWAAI LVTLVGGVII SGVIGTMTYY VVRSKRSRSM RKKEKQAARR SGSNSWHHSE FSNSEVDPIY AL

Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)

001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.