Factsheet for GSMUA_Achr9P03090_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P34410_001	Banana	cytosol	40.14	65.88
GSMUA_Achr11P...	Banana	cytosol	34.65	59.06
GSMUA_Achr5P07190_001	Banana	cytosol	35.01	55.7
GSMUA_Achr9P04170_001	Banana	cytosol	33.69	55.29
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	35.84	53.76
GSMUA_Achr6P33220_001	Banana	cytosol	35.13	53.75
Bra038714.1-P	Field mustard	cytosol, plastid	36.08	52.34
Bra034760.1-P	Field mustard	cytosol	36.56	52.31
CDY42145	Canola	cytosol	36.44	52.14
AT3G12360.1	Thale cress	cytosol	36.56	51.86
CDY50551	Canola	cytosol	36.2	51.44
Os01t0837000-01	Rice	cytosol	34.17	51.44
CDY50335	Canola	cytosol	36.08	51.27
HORVU3Hr1G087050.1	Barley	cytosol	33.81	51.18
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	35.6	51.03
TraesCS3A01G354800.1	Wheat	cytosol	33.81	50.99
TraesCS3B01G387800.2	Wheat	cytosol	33.69	50.9
Solyc05g054830.2.1	Tomato	nucleus	35.48	50.86
KRG92972	Soybean	cytosol	35.48	50.77
EES03848	Sorghum	cytosol	33.69	50.72
TraesCS3D01G348800.2	Wheat	cytosol	33.57	50.63
Zm00001d042948_P001	Maize	cytosol	33.45	50.27
VIT_13s0067g03880.t01	Wine grape	cytosol	35.36	50.25
CDY07932	Canola	nucleus, plastid	35.6	49.75
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	37.75	49.53
KRH36223	Soybean	cytosol	34.89	49.32
Bra001304.1-P	Field mustard	nucleus	35.6	48.93
CDX73985	Canola	nucleus	35.6	48.93
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	35.48	48.37
Solyc10g084550.1.1	Tomato	plastid	32.74	46.84
CDY08436	Canola	cytosol	36.56	46.36
PGSC0003DMT400028722	Potato	cytosol, plastid	33.57	46.07
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	11.23	40.17
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	21.51	34.68
GSMUA_Achr8P02120_001	Banana	cytosol	21.15	32.9
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	21.15	30.68
GSMUA_Achr6P33230_001	Banana	cytosol	21.39	30.19
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	21.74	28.0
GSMUA_Achr7P23730_001	Banana	cytosol	10.27	27.13
GSMUA_Achr9P04150_001	Banana	plasma membrane	20.67	26.29
GSMUA_Achr9P02740_001	Banana	cytosol	10.87	15.5
GSMUA_Achr7P12630_001	Banana	cytosol	11.11	14.29
GSMUA_Achr9P02700_001	Banana	cytosol	6.21	13.51
GSMUA_Achr9P02690_001	Banana	plasma membrane	9.08	13.19
GSMUA_Achr9P02720_001	Banana	cytosol	5.97	12.85

Protein Annotations

Gene3D:1.20.1280.170	Gene3D:1.25.40.20	MapMan:22.6.3.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr9G03090_001	EnsemblPlants:GSMUA_Achr9P03090_001
EnsemblPlants:GSMUA_Achr9T03090_001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0TX18	PFAM:PF03081
PFAM:PF12796	PFAM:PF13637	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF74788	TMHMM:TMhelix
UniParc:UPI000295F7FC	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G03090_001]

Coordinates

chr9:-:2197708..2202676

Molecular Weight (calculated)

91806.2 Da

IEP (calculated)

8.201

GRAVY (calculated)

0.019

Length

837 amino acids

Sequence
(BLAST)

001: MISAGYTKEC VRVYKTVSKS FIDKSIRRLG FERLTQSQVQ KLDGSALESR IRAWLAAAPI AFRILFSRER LLCDRIFAGS DAVRESCFAD VARDAAAALL
101: AFPESAARSK RSPEKLFRIL DLYDTLVELW PDIESLFIFE STAAVRSQAV VSLLRLAEVA RSTLADFEAA IERDASRSPV PGGDVHPLTR YVMNYLVFLA
201: DYELALDDIF ADFPLQTPSP LLDSFFEAAA VATSSSSAAA RSISDRIAWL VLVLICKLDG KAELYREAAL SYLFLANNIQ YILRKVKESG LGPHLGDEWV
301: ARHGAKARHY AASYVQLAWA KVAAAIPADV SGMEAEERMR GINAALEAEC RGQAGWVVVS DGGLREEVRE AVAEMVVPAY RVFYERCRPM LRDSGAGSTA
401: VVRFSPEDVS NHLNGIFSGS TGSGSSRNRE GAEVMSAVVN ETNDFRETAL MTAAEKGQLG VVAELLKYSN KASISRKNRS GFDAFHVAVK GGHQDIVRLL
501: LSHDPTLGKT FGPSNVTPLI SAAARGHTQI RPCRAIESIA GERSTTRSRT DIKGQTALQM AAKGTSHDVI EALVDADPAI VMLPDKYGNT ALHVATRKKR
601: AEIIELTPIV CRDDTANSDT NFRYSYDIAE ELPLSEEYTY IKECLCRHGA LRSKELNQPR DELRKTVTEI KKDVHTQLEQ TRKTNKNVYG IAKELRKLHT
701: EGINNATNSV TVVAVLFATV AFAAIFTVPG GSEDDGVAVA VHAASFRIFF IFNAIALFTS LAVVVVQITL VRRETKSERR VVEVINKLMW LASVCTTVAF
801: RTSTYIVLGH RLQWAAALVM LIGGVIMAGV LGSMTLW

Best Arabidopsis Sequence Match ( AT3G09550.1 )
(BLAST)

001: MGSRIEEEKE LEPGMEKGLA TDPTSPTGST VADLSPTPTP RKTLVLSNSG KALMVSNSSK SLGLSNSGKR FDPTGKKKYV KQVTGRHNDT ELHLAAQRGD
101: LASVKQILSD IDSQITGTIT GADFDDEVAQ IMTSVVNEVN ELGETPLFTA AEKGNIDVVK ELLPYTTIES LMQKNLSGFD ALHIACSQGH RSIVQLLLEH
201: EPQLSKTVAQ SNATPLVSAA TRGHSEVVNE LLAKDSSLLE ISRSNGKNAL HLAARQGHVD IVRTLLDKDP QLARRTDKKG QTSLHMAVKG VSSQVVRLLL
301: RADPAIVMLP DKFGNTVLHI ATRKKRAEIV NELLQLPDTN VNALTRDHKT AYDIAEGLTH SEETAEIKEI LSRCGALKAN ELNQPRDELR KTVTEIKKDV
401: HTQLEQTRKT NKNVDGIAKE LRKLHRAGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD HGVAVMVHAT SFKIFFIFNA IALFTSLAVV VVQITLVRGE
501: TKTERRVVEV INKLMWLASV CTTVAFISSS YIVVGRRNRY AAVVVTVIGT VTMTGILSIM TYYVVKSKRT RIVRKKEKKK SARNGTSSWH HANPSETESE
601: VNPIYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.