Factsheet for Zm00001d042948_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03848	Sorghum	cytosol	97.49	97.66
Os01t0837000-01	Rice	cytosol	90.66	90.83
TraesCS3B01G387800.2	Wheat	cytosol	89.23	89.71
TraesCS3D01G348800.2	Wheat	cytosol	89.23	89.55
HORVU3Hr1G087050.1	Barley	cytosol	88.87	89.51
TraesCS3A01G354800.1	Wheat	cytosol	89.05	89.37
GSMUA_Achr6P34410_001	Banana	cytosol	66.97	73.14
KRG92972	Soybean	cytosol	66.07	62.91
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	65.89	62.84
Solyc05g054830.2.1	Tomato	nucleus	65.53	62.5
KRH36223	Soybean	cytosol	66.07	62.16
CDY42145	Canola	cytosol	64.81	61.71
Bra038714.1-P	Field mustard	cytosol, plastid	63.91	61.7
Bra034760.1-P	Field mustard	cytosol	64.63	61.54
VIT_13s0067g03880.t01	Wine grape	cytosol	64.99	61.46
AT3G12360.1	Thale cress	cytosol	64.81	61.19
CDY50335	Canola	cytosol	64.27	60.78
CDY07932	Canola	nucleus, plastid	65.35	60.77
CDY50551	Canola	cytosol	64.09	60.61
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.76	60.03
CDX73985	Canola	nucleus	65.35	59.77
Bra001304.1-P	Field mustard	nucleus	65.35	59.77
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	65.53	59.45
Solyc10g084550.1.1	Tomato	plastid	60.86	57.95
PGSC0003DMT400028722	Potato	cytosol, plastid	62.48	57.05
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	69.84	56.21
Zm00001d047772_P002	Maize	plastid	70.02	56.03
CDY08436	Canola	cytosol	64.63	54.55
Zm00001d051244_P001	Maize	cytosol	10.59	47.97
Zm00001d051806_P001	Maize	cytosol, plasma membrane	40.22	42.59
Zm00001d017959_P001	Maize	plasma membrane	40.22	42.59
Zm00001d028680_P001	Maize	cytosol	41.83	41.46
Zm00001d031706_P001	Maize	cytosol	39.86	39.57
Zm00001d006147_P002	Maize	cytosol	39.14	38.79
Zm00001d006142_P002	Maize	cytosol	39.14	38.79
Zm00001d021169_P002	Maize	cytosol	39.5	38.39
Zm00001d025440_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	21.36	38.14
Zm00001d005701_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	21.18	37.82
Zm00001d033803_P001	Maize	plasma membrane, vacuole	21.01	37.5
GSMUA_Achr9P03090_001	Banana	cytosol	50.27	33.45
Zm00001d030264_P001	Maize	plastid	13.11	27.44
Zm00001d000158_P001	Maize	mitochondrion	20.83	20.9
Zm00001d025365_P001	Maize	cytosol	7.36	20.71
Zm00001d013327_P001	Maize	cytosol	21.01	20.63
Zm00001d007725_P001	Maize	cytosol	19.75	19.82
Zm00001d007743_P001	Maize	cytosol	19.57	19.06
Zm00001d004738_P001	Maize	plasma membrane	22.08	18.17
Zm00001d021662_P002	Maize	plastid	21.01	16.98
Zm00001d037628_P002	Maize	plasma membrane	18.31	10.05

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100281471	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
UniProt:B6SVN9	EMBL:EU956804	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	ProteinID:ONM36595.1
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF68	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000182B9EA	EnsemblPlantsGene:Zm00001d042948
EnsemblPlants:Zm00001d042948_P001	EnsemblPlants:Zm00001d042948_T001	SEG:seg	:	:	:

Description

Protein binding protein

Coordinates

chr3:+:184682796..184686562

Molecular Weight (calculated)

60453.8 Da

IEP (calculated)

9.705

GRAVY (calculated)

-0.137

Length

557 amino acids

Sequence
(BLAST)

001: MSLEIHEEDG GASGARSATK VMSVSGSGKR GRYVRQVTGR HNDTDLHVAA RGGDAAALRR ALLDAAAAVA ATGEAPEDLE AARRAVAAEP NEAGETPLVA
101: AAERGHLGVV VELLRHLDAE GLAAKNRSGY DALHVAAREG RHAVVQEMLN HDRMLAKTSG PANTTPLISA AMRGHIEVVE LLLEQDDFGL VEMARDNGKN
201: ALHFAARQGH TGIVKALLEK DPQLARRNDK KGQTALHMAV KGTSCDVLRA LVDADPAIVM LPDKNGNTAL HVATRKKRAE IVSVLLRLPD THVNALTRDH
301: KTAFDIAEGL PVCEESCEIK DILSQHGALR SRELNQPRDE LRKTVTEIKK DVHTQLEQTR KTNKNVHGIA KELRKLHREG INNATNSVTV VAVLFATVAF
401: AAIFTVPGGN DNNGLAVVVQ TTSFKIFFIF NAVALFTSLA VVVVQITVVR GETKSERRVV EVINKLMWIA SVCTTISFIA SCYIVLGRHF QWAAILVSLI
501: GGVTMAGVLG TMTYYVVKSK RQRKIRKKEK MSRRSGSSSW YDNTELSDTE LNPVYAL

Best Arabidopsis Sequence Match ( AT3G09550.1 )
(BLAST)

001: MGSRIEEEKE LEPGMEKGLA TDPTSPTGST VADLSPTPTP RKTLVLSNSG KALMVSNSSK SLGLSNSGKR FDPTGKKKYV KQVTGRHNDT ELHLAAQRGD
101: LASVKQILSD IDSQITGTIT GADFDDEVAQ IMTSVVNEVN ELGETPLFTA AEKGNIDVVK ELLPYTTIES LMQKNLSGFD ALHIACSQGH RSIVQLLLEH
201: EPQLSKTVAQ SNATPLVSAA TRGHSEVVNE LLAKDSSLLE ISRSNGKNAL HLAARQGHVD IVRTLLDKDP QLARRTDKKG QTSLHMAVKG VSSQVVRLLL
301: RADPAIVMLP DKFGNTVLHI ATRKKRAEIV NELLQLPDTN VNALTRDHKT AYDIAEGLTH SEETAEIKEI LSRCGALKAN ELNQPRDELR KTVTEIKKDV
401: HTQLEQTRKT NKNVDGIAKE LRKLHRAGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD HGVAVMVHAT SFKIFFIFNA IALFTSLAVV VVQITLVRGE
501: TKTERRVVEV INKLMWLASV CTTVAFISSS YIVVGRRNRY AAVVVTVIGT VTMTGILSIM TYYVVKSKRT RIVRKKEKKK SARNGTSSWH HANPSETESE
601: VNPIYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.