Factsheet for Bra038714.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50551	Canola	cytosol	99.48	97.45
Bra034760.1-P	Field mustard	cytosol	96.71	95.38
AT3G12360.1	Thale cress	cytosol	95.49	93.39
VIT_13s0067g03880.t01	Wine grape	cytosol	78.34	76.74
KRG92972	Soybean	cytosol	77.64	76.58
GSMUA_Achr11P...	Banana	cytosol	64.99	76.37
KRH36223	Soybean	cytosol	78.16	76.18
GSMUA_Achr9P04170_001	Banana	cytosol	67.24	76.08
GSMUA_Achr5P07190_001	Banana	cytosol	68.8	75.48
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	71.75	74.19
GSMUA_Achr6P33220_001	Banana	cytosol	68.63	72.39
GSMUA_Achr6P34410_001	Banana	cytosol	63.78	72.16
Bra001304.1-P	Field mustard	nucleus	72.27	68.47
EES03848	Sorghum	cytosol	61.7	64.03
Zm00001d042948_P001	Maize	cytosol	61.7	63.91
Os01t0837000-01	Rice	cytosol	61.35	63.67
HORVU3Hr1G087050.1	Barley	cytosol	60.66	63.29
TraesCS3A01G354800.1	Wheat	cytosol	60.83	63.24
TraesCS3B01G387800.2	Wheat	cytosol	60.49	63.0
TraesCS3D01G348800.2	Wheat	cytosol	60.31	62.7
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	71.58	60.56
EER95067	Sorghum	cytosol, nucleus, plasma membrane	72.1	60.47
Zm00001d047772_P002	Maize	plastid	72.62	60.2
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	71.75	59.83
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	71.92	59.8
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	71.92	59.71
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	72.1	58.84
TraesCS4A01G102200.2	Wheat	nucleus	71.75	57.34
Bra006680.1-P	Field mustard	plastid	42.29	44.69
Bra018683.1-P	Field mustard	cytosol	41.25	44.16
Bra009576.1-P	Field mustard	cytosol	37.95	41.56
Bra024863.1-P	Field mustard	cytosol	36.22	39.21
Bra030618.1-P	Field mustard	cytosol	39.51	37.25
GSMUA_Achr9P03090_001	Banana	cytosol	52.34	36.08
Bra021752.1-P	Field mustard	cytosol	40.38	35.79
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	35.7	33.39
Bra018445.1-P	Field mustard	cytosol	20.28	19.63
Bra018444.1-P	Field mustard	cytosol	19.76	19.22
Bra029009.1-P	Field mustard	cytosol	14.56	19.0
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	10.23	18.79
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.2	18.23
Bra000823.1-P	Field mustard	plasma membrane	13.52	17.57
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.2	17.16
Bra023774.1-P	Field mustard	plasma membrane	17.68	16.72
Bra033416.1-P	Field mustard	cytosol	15.77	16.22
Bra034209.1-P	Field mustard	cytosol	17.5	16.19
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.98	13.9
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.81	13.53

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra038714
EnsemblPlants:Bra038714.1	EnsemblPlants:Bra038714.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4FC98
PFAM:PF00023	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0002545244
SEG:seg	:	:	:	:	:

Description

AT3G12360 (E=6e-265) ITN1 | ITN1 (INCREASED TOLERANCE TO NACL); protein binding

Coordinates

chrA01:-:26453913..26456155

Molecular Weight (calculated)

62672.5 Da

IEP (calculated)

9.973

GRAVY (calculated)

-0.136

Length

577 amino acids

Sequence
(BLAST)

001: MVKGGMILQS SESQTAMLDP SPTPSPSATA TAPALVLSNS GKRMDQAGKK KYVKQVTGRH NDTELHLAAQ RGDLSAVQQI LKDINSQMEG TLSGEEFDAE
101: VAEIRASIVN EVNELGETAL FTAADKGHLD VVKELLKYSS RESIAKKNRS GYDPLHIAAI QGHHAIVEVL LDHDSTLSHT FGPSNATPLV SAAMRGHTEV
201: VNQLLSKAGN LLEISRSNHK NALHLAARQG HVDVIKALLA KDSHLARRVD KKGQTALHMA VKGQSSEVVK LLLDADPAIV MLPDKSCNTA LHVATRKKRA
301: EIVELLLSLP DTNANALTRE RKTALDIAEG LPLSEESSYI KESLARCGAL RANELNQPRD ELRSTVTQIK NDVHIQLEQT KRTNKNVHNI SKELRKLHRE
401: GINNATNSVT VVAVLFATVA FAAIFTVPGG DNNDGSAVVV GRASFKIFFI FNAIALFTSL AVVVVQITLV RGETKAEKRV VEVINKLMWL ASMCTSVAFL
501: ASSYIVVGRK NEWAAELVTV VGGVIMAGVL GTMTYYVVKS KRVRSMRKRI KSARRSGSNS WHHSDHSNSE VDPIFAI

Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)

001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.