Factsheet for Bra018444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20943	Canola	cytosol	92.75	95.65
CDY20639	Canola	cytosol, peroxisome, plasma membrane	70.49	91.27
AT1G10340.1	Thale cress	cytosol	73.69	75.61
Bra018445.1-P	Field mustard	cytosol	74.03	73.66
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.4	64.97
Bra029009.1-P	Field mustard	cytosol	33.56	45.02
VIT_09s0002g03920.t01	Wine grape	cytosol	35.24	36.54
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	35.58	32.61
VIT_09s0002g03910.t01	Wine grape	plasma membrane	37.77	31.07
Bra018683.1-P	Field mustard	cytosol	20.74	22.82
Bra006680.1-P	Field mustard	plastid	19.22	20.88
Bra009576.1-P	Field mustard	cytosol	18.55	20.87
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	20.91	20.1
Bra038714.1-P	Field mustard	cytosol, plastid	19.22	19.76
Bra001304.1-P	Field mustard	nucleus	20.24	19.7
Bra030618.1-P	Field mustard	cytosol	20.07	19.44
Bra034760.1-P	Field mustard	cytosol	19.06	19.32
Bra021752.1-P	Field mustard	cytosol	21.08	19.2
Bra024863.1-P	Field mustard	cytosol	16.69	18.57
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.86	16.34
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	15.68	16.15
Bra023774.1-P	Field mustard	plasma membrane	16.53	16.07
Bra000823.1-P	Field mustard	plasma membrane	11.8	15.77
Bra034209.1-P	Field mustard	cytosol	15.51	14.74
Bra033416.1-P	Field mustard	cytosol	13.49	14.26
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	13.83	11.63
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	13.32	11.02

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra018444
EnsemblPlants:Bra018444.1	EnsemblPlants:Bra018444.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4DPK3
PFAM:PF12796	PFAM:PF13637	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24177	PANTHER:PTHR24177:SF18	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0002547F45
SEG:seg	:	:	:	:	:

Description

AT1G10340 (E=4e-135) | ankyrin repeat family protein

Coordinates

chrA05:+:8250963..8253249

Molecular Weight (calculated)

65933.7 Da

IEP (calculated)

7.206

GRAVY (calculated)

0.032

Length

593 amino acids

Sequence
(BLAST)

001: MQPIFHAILQ NELPAFLSLV RERDSWLEER NDEQHSNTVL HMAAKHGRGE FVSKIIELRR PSLICSRNAY GNTPLHLAAL FGDVNIIMTM LEFGPEACSA
101: RNNNNQTPLH LACRSISVES ATLFAETIQS VGLHELNFAI LSGMAGIAGT ILERFPDLAR EEAWPVQGGS LSSLLHHACD RGDLELTRIL LGLHERLDEA
201: LDTNGLSPLH LAVLRGSVVI LEEFLNKAPL SFYSLTPSKE SVFHLAARNN NMDAFVFMAE SVGIDSQILL QQTDEDGNTV LHVAASVACG APFVHYIRKR
301: TDKRCKNNFG FAAYQLIPQE AVNFELLSRW LRFDTETPEE LNSEEYDGHS RPIQQQSLGR VKSLGIRGRS DEDQVIRMLT LIEINTSEIA ERKRRSKEEK
401: VKRDHEGLEY KMHIEALQNA RNTIAIVAVL IASVAYAGGI NPPGGVYQDG PWRGKSIVGK TTAFKVFAIC NNIALFTSLC IVILLVSIIP FKRKPLKRLL
501: VVTHKMMWVS VGFMATAYVA ASWVTIPHYH GTRWLFPAII AIGGGALVVL FSYLVVETIG HWFRKLNRVG DIPSFASTCS DLAVSGVSGY FTY

Best Arabidopsis Sequence Match ( AT1G10340.1 )
(BLAST)

001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY

Arabidopsis Description

Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.