Factsheet for Bra009576.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
PTS1:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70132	Canola	cytosol	99.43	99.43
CDY10435	Canola	cytosol	97.91	97.91
AT5G02620.5	Thale cress	cytosol	90.89	87.57
VIT_08s0040g02760.t01	Wine grape	cytosol	62.81	61.18
KRH67582	Soybean	cytosol	57.31	57.97
Bra018683.1-P	Field mustard	cytosol	58.63	57.33
GSMUA_Achr8P02120_001	Banana	cytosol	57.5	56.32
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	56.55	56.23
Bra006680.1-P	Field mustard	plastid	56.93	54.95
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	56.36	54.9
PGSC0003DMT400061439	Potato	cytosol, peroxisome, plasma membrane	56.17	54.71
TraesCS4B01G202300.1	Wheat	cytosol	55.41	54.07
TraesCS4D01G203200.1	Wheat	cytosol	55.03	53.7
TraesCS4A01G102300.1	Wheat	cytosol	54.84	52.93
Os03t0281100-00	Rice	cytosol	55.6	51.86
Zm00001d028680_P001	Maize	cytosol	55.03	51.6
GSMUA_Achr6P33230_001	Banana	cytosol	57.31	50.93
EER95066	Sorghum	cytosol	53.32	49.56
GSMUA_Achr9P04150_001	Banana	plasma membrane	56.55	45.29
Bra030618.1-P	Field mustard	cytosol	50.85	43.79
HORVU4Hr1G058450.9	Barley	plastid	48.39	41.46
Bra021752.1-P	Field mustard	cytosol	50.85	41.17
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	46.11	39.38
Bra038714.1-P	Field mustard	cytosol, plastid	41.56	37.95
Bra024863.1-P	Field mustard	cytosol	38.33	37.9
Bra034760.1-P	Field mustard	cytosol	41.75	37.61
Bra001304.1-P	Field mustard	nucleus	41.37	35.8
Bra029009.1-P	Field mustard	cytosol	18.79	22.4
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.96	21.01
Bra000823.1-P	Field mustard	plasma membrane	17.27	20.5
Bra023774.1-P	Field mustard	plasma membrane	22.2	19.18
Bra018445.1-P	Field mustard	cytosol	21.25	18.79
Bra018444.1-P	Field mustard	cytosol	20.87	18.55
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.06	18.14
Bra033416.1-P	Field mustard	cytosol	18.98	17.83
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	10.44	17.52
Bra034209.1-P	Field mustard	cytosol	20.49	17.31
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.92	14.64
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.79	14.04

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
EnsemblPlantsGene:Bra009576	EnsemblPlants:Bra009576.1	EnsemblPlants:Bra009576.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
UniProt:M4CZC9	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0002547D09
SEG:seg	:	:	:	:	:

Description

AT5G02620 (E=1e-249) | ankyrin repeat family protein

Coordinates

chrA10:-:17270258..17272333

Molecular Weight (calculated)

57174.4 Da

IEP (calculated)

8.739

GRAVY (calculated)

-0.054

Length

527 amino acids

Sequence
(BLAST)

001: MKEDNKKTMT KQITTRRDDT PLHTAVREGK TEILLEMIGE HDDDGAELKE LLAEQNQSGE TALYVAAEFG HTDMVKILMK HSDSVLAGTK AKNGFDAFHI
101: AAKNGNLKVL DVLMEANPEL SFTFDSSKTT ALHTAASQGH GEIVCFLLDK GVDLAAIARS NGKTALHSAA RNGHTEIVKE LIGKKVGMVT RVDKKGQTSL
201: HMAVKGQNAE IVDALMKADP SLINAADNKG NTPLHIAVRK NRAEIVQTVL QYDEVSRVAV NKSGETALDI AEKTSLHEIV PLLQKIGMQN ARSIKPAASV
301: EPSGSSKKLK ETVSEIGHEV HTQLEQTVRT RREIQGIGKR VNKMHTEGLN NAINSTTVVA ILIATVAFGA IFNVPGQYTD DPKNVPSGYT LGEARAASRP
401: EFLIFVVFDS FALFISLAVV VVQTSVVVIE RKAKKQMMAI INKLMWMACI MISVAFLSLS FVVVGDKERP LAIGITAIGA LIMVSTLGTM CYWVVANRIE
501: GSKSSPASMM SDADLVDHKH NRKLYAV

Best Arabidopsis Sequence Match ( AT5G02620.4 )
(BLAST)

001: MKEIKKTMTK QMTARRDDTP LHTAVREGKT DLLLEMIGEH DGVELKELLA EQNQSGETAL YVAAEYGYTD MVKILMKHSD SVLAGTKAKN GFDAFHIAAK
101: NGNLQVLDVL IEANPELSFT FDSSKTTALH TAASQGHGEI VCFLLDKGVD LAAIARSNGK TALHSAARNG HTVIVKKLIE KKAGMVTRVD KKGQTALHMA
201: VKGQNTEIVD VLMEADGSLI NSADNKGNTP LHIAVRKNRA EIVQTVLKYC EVSRVAVNKS GETALDIAEK TGLHEIVPLL QKIGMQNARS IKPAEKVEPS
301: GSSRKLKETV SEIGHEVHTQ LEQTGRTRRE IQGIAKRVNK MHTEGLNNAI NSTTLVAILI ATVAFAAIFN VPGQYTDDPK DVPPGYSLGE ARAAPRPEFL
401: IFVVFDSFAL FISLAVVVVQ TSVVVIERRA KKQMMAIINK LMWMACIMIS VAFVSLSFVV VGEKEKPLAV GVTAIGALIM VSTLGTMCYW VIANRIEGSK
501: SSPASMMSDP ELADSKHNRK LYAV

Arabidopsis Description

ANK1ankyrin-like1 [Source:TAIR;Acc:AT5G02620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.