Factsheet for HORVU4Hr1G058450.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G203200.1	Wheat	cytosol	71.87	81.85
TraesCS4B01G202300.1	Wheat	cytosol	71.71	81.67
TraesCS4A01G102300.1	Wheat	cytosol	70.73	79.67
Os03t0281100-00	Rice	cytosol	65.69	71.5
CDX93618	Canola	cytosol	32.68	69.79
Zm00001d028680_P001	Maize	cytosol	63.58	69.57
EER95066	Sorghum	cytosol	61.95	67.2
CDY55069	Canola	cytosol, peroxisome, plasma membrane	25.37	65.0
GSMUA_Achr8P02120_001	Banana	cytosol	55.77	63.75
KRH22984	Soybean	cytosol	51.06	57.61
GSMUA_Achr6P33230_001	Banana	cytosol	55.28	57.34
Bra018683.1-P	Field mustard	cytosol	50.08	57.14
KRG88671	Soybean	cytosol, plastid	50.73	56.83
CDX95126	Canola	cytosol	49.76	56.67
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	49.92	56.64
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	49.76	56.35
KRH10329	Soybean	cytosol	49.76	56.15
PGSC0003DMT400078144	Potato	cytosol	48.46	55.7
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	48.46	55.7
KRH25003	Soybean	cytosol, plastid	49.59	55.66
VIT_08s0040g02760.t01	Wine grape	cytosol	48.94	55.64
CDX71059	Canola	plastid	48.13	54.21
Bra006680.1-P	Field mustard	plastid	47.97	54.03
CDX88738	Canola	plastid	46.83	53.73
AT5G60070.1	Thale cress	cytosol, plastid	47.64	53.47
PGSC0003DMT400040191	Potato	cytosol	46.5	53.36
Solyc11g072960.1.1	Tomato	cytosol	46.02	53.3
KRH67582	Soybean	cytosol	44.23	52.21
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	44.39	51.51
GSMUA_Achr9P04150_001	Banana	plasma membrane	54.15	50.61
PGSC0003DMT400025094	Potato	cytosol	44.23	50.37
CDY59983	Canola	cytosol	24.39	49.67
CDX99605	Canola	cytosol	22.93	49.47
CDX73200	Canola	cytosol	24.23	49.34
CDY70132	Canola	cytosol	41.63	48.58
CDY10435	Canola	cytosol	41.63	48.58
Bra009576.1-P	Field mustard	cytosol	41.46	48.39
PGSC0003DMT400061439	Potato	cytosol, peroxisome, plasma membrane	42.11	47.87
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.11	47.87
AT5G02620.5	Thale cress	cytosol	41.79	46.98
Solyc06g005240.2.1	Tomato	cytosol	33.66	46.0
HORVU7Hr1G056430.1	Barley	cytosol	41.14	45.92
HORVU5Hr1G079730.3	Barley	cytosol	39.67	43.19
HORVU3Hr1G087050.1	Barley	cytosol	34.8	38.7
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	34.96	30.94
HORVU5Hr1G084850.1	Barley	cytosol	15.12	25.48
HORVU4Hr1G089710.1	Barley	cytosol, extracellular	6.18	20.65
HORVU2Hr1G045100.5	Barley	plasma membrane	17.07	19.59
HORVU3Hr1G087640.1	Barley	cytosol	18.37	19.58
HORVU7Hr1G096820.1	Barley	cytosol	17.89	19.57
HORVU3Hr1G115700.1	Barley	cytosol, plastid	17.56	18.59
HORVU6Hr1G000310.2	Barley	cytosol, peroxisome	17.24	18.56
HORVU3Hr1G115640.1	Barley	plastid	17.56	18.49
HORVU1Hr1G017320.2	Barley	cytosol	8.62	17.91
HORVU0Hr1G030080.2	Barley	plasma membrane	18.54	17.73
HORVU3Hr1G115720.2	Barley	cytosol, peroxisome, plasma membrane	16.75	17.64
HORVU3Hr1G017090.2	Barley	cytosol	18.54	17.48
HORVU3Hr1G014910.1	Barley	cytosol, peroxisome	17.72	17.47
HORVU7Hr1G008610.5	Barley	cytosol, plastid	15.28	17.41
HORVU3Hr1G115520.15	Barley	mitochondrion, peroxisome, plastid	17.24	17.26
HORVU6Hr1G093780.3	Barley	plastid	14.15	17.09
HORVU6Hr1G017980.1	Barley	cytosol, peroxisome	16.75	17.02
HORVU5Hr1G023700.1	Barley	plasma membrane	16.91	16.35
HORVU6Hr1G094920.12	Barley	mitochondrion, plasma membrane	17.07	16.28
HORVU7Hr1G010020.1	Barley	cytosol, peroxisome, plastid	17.24	16.23
HORVU5Hr1G056340.3	Barley	cytosol	17.24	16.21
HORVU3Hr1G115780.11	Barley	plastid	16.42	16.08
HORVU5Hr1G009440.6	Barley	mitochondrion	17.24	16.06
HORVU2Hr1G045370.3	Barley	plastid	15.77	15.8
HORVU3Hr1G086490.1	Barley	cytosol	17.89	14.97
HORVU3Hr1G105070.7	Barley	cytosol	15.45	14.1
HORVU1Hr1G091970.5	Barley	plasma membrane	15.45	13.73
HORVU2Hr1G005760.2	Barley	cytosol, plasma membrane	15.45	13.71
HORVU1Hr1G003630.3	Barley	mitochondrion	18.21	13.69
HORVU2Hr1G003780.1	Barley	cytosol, nucleus	12.85	10.65
HORVU1Hr1G016540.30	Barley	plasma membrane	14.15	8.28
HORVU1Hr1G003650.1	Barley	cytosol	4.23	7.93
HORVU5Hr1G096710.1	Barley	cytosol	2.28	4.33
HORVU5Hr1G087080.2	Barley	cytosol	2.28	4.33

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	UniProt:A0A287P7G5	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:At2g01680/At5g02620	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU4Hr1G058450	EnsemblPlants:HORVU4Hr1G058450.9	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix
UniParc:UPI000B464F9A	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:489019752..489022690

Molecular Weight (calculated)

66083.9 Da

IEP (calculated)

10.893

GRAVY (calculated)

-0.137

Length

615 amino acids

Sequence
(BLAST)

001: DHPSADFLID PALVPSPLSY VSSALPPSGA CGSIGPGAPW PLTWRRRAPH AGLAASCLVL SGACSGFAAE PSRGNGLAQG GAGGDAAQED DQAAHREAGR
101: HGAARCGARR AARRRAGDAV RGSARGAARA AFQAEPGRGD AAVRRRRVRL RGPGERDGQV PRRRHRRHQG PQRLRRPPHC RQARGCREVV KELLQALPEL
201: AMTVDASNTT ALNTAATQGH MEVVRLLLEV DGTLALIARS NGKTALHSAA RNGHVEVVRA LLRAEPSIAL RVDKKGQTAL HMAAKGINLD LVDALLAADP
301: SLLNLPDNKG NTALHIASRK ARHQIIKRLL ELPDTNLKAI NRAAETPLDT AEKMGNGEVA GVLAENGVQS ARALSPTGGG NPARELKQQV SDIKHEVHSQ
401: LEQTRQTRVR MQGIQKRINK LHEEGLNNAI NSTTVVAVLI ATVAFAAIFT VPGEYVDADS LAPGQELGEA NIAHETPFII FFVFDSVALF ISLAVVVVQT
501: SVVVIERKAK KQMMAVINKL MWVACVLISV AFLALSFVVV GRTERWLAVA VTIMGATILV TTIGTMLYWV IAHRIEAKRM RNIKRSSMSR SRSHSGSGLS
601: EHEWVDEEFK KMYAI

Best Arabidopsis Sequence Match ( AT1G05640.1 )
(BLAST)

001: MSSLVPVMEK QESVRGNSVE EQQSLRCVGA ENQVRKGRAL DKQVSFLAVN VVEKHGIKGR AMEKQERAME RQRSFRGFVE KQKSFRVVME RQLSFMNVGG
101: ERKKKTDSPG KRGDSPLHLA ARTGNLGKVM ELIRACNGIE ELKELSSKQN LEGETPLYSA AENGHSLVVE EMLKHMDLDT ASVKARNGFD PFHVAAKQGH
201: IEALKKLLET FPNLAMTVDL SCTTALHTAA SQGHTDVVNL LLKTDSHLAK IAKNNGKTAL HSAARMGHRE VVKSLIGNDA SIGFRTDKKG QTALHMAVKG
301: QNEGIVLELV KPDPAILSVE DSKGNTPLHT ATNKGRIKIV RCLVSFDGIN LNAMNKAGDT ALDIAEKIGN PELVSVLKEA GAATAKDLGK PRNPAKQLNQ
401: TVSDIKHEVQ SQLQQSRQTG VRVRRIAKRL KKLHINGLNN AINSATVVAV LIATVAFAAI FTIPGQYEED RTKGLLLLGE ARIAGKAPFL VFFIFDSLAL
501: FISLAVVVVQ TSVVVIEQKA KKNLVFVINK LMWLACLFIS VAFVSLSFIV VGKEDIWLAI CATIIGGTIM LTTIGAMCYC VVMHRIEESK LKSLRKERSK
601: SKSFSLSHMP SESEILNGEF NKRMYAL

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SYK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.