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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • plastid 1
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93618 Canola cytosol 50.46 95.14
Bra018683.1-P Field mustard cytosol 93.74 94.43
CDX95126 Canola cytosol 93.55 94.07
CDY55069 Canola cytosol, peroxisome, plasma membrane 37.38 84.58
PGSC0003DMT400078144 Potato cytosol 70.72 71.78
Solyc06g075600.2.1 Tomato cytosol, peroxisome, plasma membrane 69.98 71.03
AT5G60070.1 Thale cress cytosol, plastid 69.61 68.98
GSMUA_Achr8P02120_001 Banana cytosol 68.14 68.77
Solyc11g072960.1.1 Tomato cytosol 64.83 66.29
PGSC0003DMT400040191 Potato cytosol 65.19 66.04
TraesCS4B01G202300.1 Wheat cytosol 65.56 65.93
TraesCS4D01G203200.1 Wheat cytosol 65.38 65.74
PGSC0003DMT400025094 Potato cytosol 65.19 65.56
CDX99605 Canola cytosol 34.07 64.91
CDY59983 Canola cytosol 35.91 64.57
CDX73200 Canola cytosol 35.91 64.57
TraesCS4A01G102300.1 Wheat cytosol 64.64 64.29
Solyc06g005240.2.1 Tomato cytosol 51.38 62.0
Os03t0281100-00 Rice cytosol 64.27 61.77
GSMUA_Achr6P33230_001 Banana cytosol 66.67 61.05
Zm00001d028680_P001 Maize cytosol 62.06 59.96
EER95066 Sorghum cytosol 61.51 58.91
AT5G02620.5 Thale cress cytosol 58.38 57.95
GSMUA_Achr9P04150_001 Banana plasma membrane 64.83 53.5
HORVU4Hr1G058450.9 Barley plastid 56.35 49.76
AT1G05640.1 Thale cress cytosol 55.8 48.33
AT2G31820.1 Thale cress cytosol, nucleus, plasma membrane 56.35 46.22
AT2G01680.1 Thale cress cytosol, plasma membrane 40.88 41.73
AT3G12360.1 Thale cress cytosol 44.2 40.68
AT3G09550.2 Thale cress cytosol, nucleus, plasma membrane 43.65 38.6
AT1G10340.1 Thale cress cytosol 22.65 21.28
AT2G24600.4 Thale cress cytosol, peroxisome, plasma membrane 22.28 20.13
AT5G50140.1 Thale cress plasma membrane 19.52 19.81
AT1G34050.1 Thale cress cytosol, peroxisome, plasma membrane 20.63 19.55
AT5G54710.2 Thale cress cytosol 22.84 19.28
AT5G54700.1 Thale cress cytosol 16.02 18.12
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 19.71 17.37
AT4G03460.1 Thale cress peroxisome 19.89 17.2
AT4G03450.1 Thale cress plasma membrane 19.52 16.54
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 19.71 16.41
AT4G05040.1 Thale cress cytosol 17.13 16.26
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 20.81 15.92
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 19.34 15.67
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 18.97 15.08
AT4G14390.1 Thale cress plasma membrane 18.78 14.7
AT4G03480.1 Thale cress mitochondrion 16.94 13.96
AT4G03440.1 Thale cress cytosol 17.68 12.78
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1EntrezGene:837285ProteinID:AAF75083.1ProteinID:AEE28168.1ProteinID:ANM57696.1
ArrayExpress:AT1G07710EnsemblPlantsGene:AT1G07710RefSeq:AT1G07710TAIR:AT1G07710RefSeq:AT1G07710-TAIR-GEnsemblPlants:AT1G07710.1
TAIR:AT1G07710.1InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfUnigene:At.51520InterPro:At2g01680/At5g02620
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0008150GO:GO:0016020
GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770RefSeq:NP_001318946.1RefSeq:NP_172250.1
PFAM:PF12796PFAM:PF13962InterPro:PGG_domPO:PO:0000293PFscan:PS50088PFscan:PS50297
PANTHER:PTHR24186PANTHER:PTHR24186:SF10UniProt:Q9LQP7SMART:SM00248SUPFAM:SSF48403TMHMM:TMhelix
UniParc:UPI00000A4E84SEG:seg::::
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
Coordinates
chr1:-:2386164..2388350
Molecular Weight (calculated)
58914.7 Da
IEP (calculated)
9.041
GRAVY (calculated)
0.034
Length
543 amino acids
Sequence
(BLAST)
001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.