Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029009.1-P | Field mustard | cytosol | 43.93 | 53.17 |
| AT1G34050.1 | Thale cress | cytosol, peroxisome, plasma membrane | 43.36 | 40.49 |
| AT5G54700.1 | Thale cress | cytosol | 35.89 | 40.0 |
| AT1G10340.1 | Thale cress | cytosol | 39.25 | 36.33 |
| AT5G54710.2 | Thale cress | cytosol | 43.36 | 36.08 |
| AT2G24600.4 | Thale cress | cytosol, peroxisome, plasma membrane | 38.69 | 34.44 |
| VIT_09s0002g03920.t01 | Wine grape | cytosol | 32.34 | 30.24 |
| KRH09919 | Soybean | cytosol, peroxisome, plasma membrane | 33.08 | 27.36 |
| VIT_09s0002g03910.t01 | Wine grape | plasma membrane | 34.02 | 25.24 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 19.81 | 19.52 |
| AT5G60070.1 | Thale cress | cytosol, plastid | 18.32 | 17.88 |
| AT5G02620.5 | Thale cress | cytosol | 17.57 | 17.18 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 17.01 | 17.11 |
| AT1G05640.1 | Thale cress | cytosol | 20.0 | 17.07 |
| AT2G31820.1 | Thale cress | cytosol, nucleus, plasma membrane | 20.56 | 16.62 |
| AT3G12360.1 | Thale cress | cytosol | 17.57 | 15.93 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 17.76 | 15.47 |
| AT1G03670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 16.26 | 14.12 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 16.64 | 13.65 |
| AT4G03460.1 | Thale cress | peroxisome | 15.7 | 13.38 |
| AT4G03490.3 | Thale cress | cytosol, peroxisome, plasma membrane | 16.07 | 12.11 |
| AT4G03450.1 | Thale cress | plasma membrane | 14.21 | 11.86 |
| AT4G14400.1 | Thale cress | cytosol, nucleus, peroxisome | 13.83 | 11.04 |
| AT4G03470.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 14.02 | 10.98 |
| AT4G05040.1 | Thale cress | cytosol | 11.59 | 10.84 |
| AT4G14390.1 | Thale cress | plasma membrane | 13.83 | 10.66 |
| AT4G03480.1 | Thale cress | mitochondrion | 12.71 | 10.32 |
| AT4G03440.1 | Thale cress | cytosol | 13.46 | 9.59 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:835079 | ProteinID:AED95903.1 | ArrayExpress:AT5G50140 | EnsemblPlantsGene:AT5G50140 |
| RefSeq:AT5G50140 | TAIR:AT5G50140 | RefSeq:AT5G50140-TAIR-G | EnsemblPlants:AT5G50140.1 | TAIR:AT5G50140.1 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.55468 | ProteinID:BAB10300.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_199825.1 |
| PFAM:PF00023 | PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 |
| PANTHER:PTHR24177 | PANTHER:PTHR24177:SF18 | UniProt:Q9FG97 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix |
| UniParc:UPI00000A22B7 | SEG:seg | : | : | : | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
Coordinates
chr5:+:20395856..20398197
Molecular Weight (calculated)
59143.7 Da
IEP (calculated)
6.423
GRAVY (calculated)
0.041
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.