Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20635 | Canola | plasma membrane | 78.37 | 77.7 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 60.55 | 76.42 |
| CDY20943 | Canola | cytosol | 75.78 | 76.17 |
| Bra018445.1-P | Field mustard | cytosol | 78.37 | 76.01 |
| Bra018444.1-P | Field mustard | cytosol | 75.61 | 73.69 |
| AT2G24600.4 | Thale cress | cytosol, peroxisome, plasma membrane | 75.09 | 72.21 |
| AT1G34050.1 | Thale cress | cytosol, peroxisome, plasma membrane | 43.77 | 44.15 |
| AT5G54710.2 | Thale cress | cytosol | 43.94 | 39.5 |
| AT5G50140.1 | Thale cress | plasma membrane | 36.33 | 39.25 |
| VIT_09s0002g03920.t01 | Wine grape | cytosol | 36.85 | 37.24 |
| AT5G54700.1 | Thale cress | cytosol | 30.45 | 36.67 |
| KRH09919 | Soybean | cytosol, peroxisome, plasma membrane | 37.2 | 33.23 |
| VIT_09s0002g03910.t01 | Wine grape | plasma membrane | 39.1 | 31.35 |
| CDY20642 | Canola | nucleus | 58.65 | 23.76 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 21.28 | 22.65 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 21.28 | 20.03 |
| AT5G60070.1 | Thale cress | cytosol, plastid | 18.86 | 19.89 |
| AT3G12360.1 | Thale cress | cytosol | 20.24 | 19.83 |
| AT5G02620.5 | Thale cress | cytosol | 18.69 | 19.74 |
| AT2G31820.1 | Thale cress | cytosol, nucleus, plasma membrane | 21.97 | 19.18 |
| AT1G05640.1 | Thale cress | cytosol | 20.59 | 18.98 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 16.26 | 17.67 |
| AT1G03670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 16.09 | 15.1 |
| AT4G03450.1 | Thale cress | plasma membrane | 16.44 | 14.82 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 16.26 | 14.42 |
| AT4G03460.1 | Thale cress | peroxisome | 15.57 | 14.33 |
| AT4G05040.1 | Thale cress | cytosol | 13.67 | 13.81 |
| AT4G03490.3 | Thale cress | cytosol, peroxisome, plasma membrane | 16.44 | 13.38 |
| AT4G14400.1 | Thale cress | cytosol, nucleus, peroxisome | 15.4 | 13.28 |
| AT4G14390.1 | Thale cress | plasma membrane | 15.92 | 13.26 |
| AT4G03470.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 15.05 | 12.74 |
| AT4G03440.1 | Thale cress | cytosol | 14.88 | 11.45 |
| AT4G03480.1 | Thale cress | mitochondrion | 12.11 | 10.62 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:837573 | UniProt:A0A178WFS3 | ProteinID:AAD32884.1 | ProteinID:AEE28567.1 |
| EMBL:AF372975 | ArrayExpress:AT1G10340 | EnsemblPlantsGene:AT1G10340 | RefSeq:AT1G10340 | TAIR:AT1G10340 | RefSeq:AT1G10340-TAIR-G |
| EnsemblPlants:AT1G10340.1 | TAIR:AT1G10340.1 | EMBL:AY081719 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| Unigene:At.11286 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002110 |
| InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_563867.1 | ProteinID:OAP15912.1 | PFAM:PF12796 | PFAM:PF13962 |
| InterPro:PGG_dom | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF18 |
| UniProt:Q9SY76 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI00000A1167 | SEG:seg |
Description
Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
Coordinates
chr1:-:3390322..3392633
Molecular Weight (calculated)
63926.2 Da
IEP (calculated)
6.240
GRAVY (calculated)
0.064
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.