Factsheet for AT1G34050.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G10340.1	Thale cress	cytosol	44.15	43.77
AT5G50140.1	Thale cress	plasma membrane	40.49	43.36
AT2G24600.4	Thale cress	cytosol, peroxisome, plasma membrane	44.5	42.43
AT5G54700.1	Thale cress	cytosol	32.98	39.38
AT5G54710.2	Thale cress	cytosol	43.98	39.19
VIT_09s0002g03920.t01	Wine grape	cytosol	34.9	34.97
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	35.78	31.68
VIT_09s0002g03910.t01	Wine grape	plasma membrane	37.0	29.4
AT5G60070.1	Thale cress	cytosol, plastid	20.24	21.17
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	19.55	20.63
AT2G01680.1	Thale cress	cytosol, plasma membrane	19.02	20.49
AT5G02620.5	Thale cress	cytosol	19.2	20.11
AT1G05640.1	Thale cress	cytosol	21.47	19.62
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	20.94	19.54
AT3G12360.1	Thale cress	cytosol	19.02	18.47
AT2G31820.1	Thale cress	cytosol, nucleus, plasma membrane	21.29	18.43
AT1G03670.1	Thale cress	cytosol, peroxisome, plasma membrane	19.2	17.86
AT4G03460.1	Thale cress	peroxisome	17.45	15.92
AT4G03500.1	Thale cress	cytosol, peroxisome, plasma membrane	17.98	15.8
AT4G03450.1	Thale cress	plasma membrane	16.75	14.98
AT4G14390.1	Thale cress	plasma membrane	17.28	14.27
AT4G03490.3	Thale cress	cytosol, peroxisome, plasma membrane	17.45	14.08
AT4G14400.1	Thale cress	cytosol, nucleus, peroxisome	16.4	14.03
AT4G05040.1	Thale cress	cytosol	13.79	13.81
AT4G03470.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	16.06	13.47
AT4G03440.1	Thale cress	cytosol	15.71	11.98
AT4G03480.1	Thale cress	mitochondrion	13.26	11.53

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	EntrezGene:840302	ProteinID:AAG12532.1	ProteinID:AEE31666.1	ArrayExpress:AT1G34050
EnsemblPlantsGene:AT1G34050	RefSeq:AT1G34050	TAIR:AT1G34050	RefSeq:AT1G34050-TAIR-G	EnsemblPlants:AT1G34050.1	TAIR:AT1G34050.1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	RefSeq:NP_174667.1	PFAM:PF12796
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF18
UniProt:Q9FX13	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI00000A7F9A	SEG:seg

Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FX13]

Coordinates

chr1:+:12393426..12396194

Molecular Weight (calculated)

63848.8 Da

IEP (calculated)

8.090

GRAVY (calculated)

0.129

Length

573 amino acids

Sequence
(BLAST)

001: MMMQEKSHLK SLEKKKMVAP IIDAILANDV STLLALAEGN LSVLRERYHW DSLGGTVLHL ATELGHKEIV EAIIKLCPSL VGVTNLDGDT PLHFAARWGH
101: ATIVAQILAS GYAEFTPVNG RGETAFVVAC RYTNPDVASL ILEETSSITI GEFYATFVLG EYTDIARRML ERFPKLAWNA DGELSTPLHH ACNANNLEIT
201: KMLLEIDESL AERVNKDGFT PLHLAAMKCS IPILKEFSDK APRYFDILTP AKETVFHLAA EHKNILAFYF MAESPDRNNL LHQVDRYGNT VLHTAVMSSC
301: YSVIVSITYE TTIDLSAKNN RGLKAVDLIN VDDEDYSKIS RWLRFDAKQI RSLSDPNHQQ GNKNMGVLSE YKKMQIFETP SKRESKMHAE ALLNARNTIT
401: IVAVLIASVA FTCGINPPGG VYQEGPYKGK STAGRTLAFQ VFSISNNIAL FTSLCIVILL VSIIPYRTRP LKNFLKLTHR ILWVAVASMA LAYVSAASII
501: IPHVEGKRWL FTTVLSISTL MLGGLFAFMT YKVIRHWLKK MTFNPMMIIM SAFTSISIGV DWLAAGSDGY YFY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.