Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G10340.1 | Thale cress | cytosol | 72.21 | 75.09 |
| CDY69308 | Canola | plasma membrane | 68.89 | 69.81 |
| CDY39673 | Canola | plasma membrane | 67.22 | 67.33 |
| Bra032143.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 34.94 | 66.88 |
| AT1G34050.1 | Thale cress | cytosol, peroxisome, plasma membrane | 42.43 | 44.5 |
| AT5G50140.1 | Thale cress | plasma membrane | 34.44 | 38.69 |
| VIT_09s0002g03920.t01 | Wine grape | cytosol | 35.27 | 37.06 |
| AT5G54710.2 | Thale cress | cytosol | 39.27 | 36.7 |
| AT5G54700.1 | Thale cress | cytosol | 29.12 | 36.46 |
| KRH09919 | Soybean | cytosol, peroxisome, plasma membrane | 34.78 | 32.3 |
| VIT_09s0002g03910.t01 | Wine grape | plasma membrane | 38.1 | 31.76 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 20.13 | 22.28 |
| AT5G60070.1 | Thale cress | cytosol, plastid | 18.47 | 20.26 |
| AT5G02620.5 | Thale cress | cytosol | 17.8 | 19.56 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 19.97 | 19.54 |
| AT2G31820.1 | Thale cress | cytosol, nucleus, plasma membrane | 21.46 | 19.49 |
| AT1G05640.1 | Thale cress | cytosol | 19.63 | 18.82 |
| AT3G12360.1 | Thale cress | cytosol | 18.3 | 18.64 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 16.14 | 18.23 |
| AT1G03670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 16.47 | 16.07 |
| AT4G03450.1 | Thale cress | plasma membrane | 15.14 | 14.2 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 14.97 | 13.8 |
| AT4G05040.1 | Thale cress | cytosol | 12.98 | 13.64 |
| AT4G14400.1 | Thale cress | cytosol, nucleus, peroxisome | 15.14 | 13.58 |
| AT4G14390.1 | Thale cress | plasma membrane | 15.64 | 13.54 |
| AT4G03460.1 | Thale cress | peroxisome | 14.14 | 13.54 |
| AT4G03470.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 15.31 | 13.47 |
| AT4G03490.3 | Thale cress | cytosol, peroxisome, plasma membrane | 15.14 | 12.82 |
| AT4G03440.1 | Thale cress | cytosol | 14.14 | 11.32 |
| AT4G03480.1 | Thale cress | mitochondrion | 11.65 | 10.62 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:816996 | ProteinID:AEC07597.1 | ProteinID:AEC07600.1 | ArrayExpress:AT2G24600 |
| EnsemblPlantsGene:AT2G24600 | RefSeq:AT2G24600 | TAIR:AT2G24600 | RefSeq:AT2G24600-TAIR-G | EnsemblPlants:AT2G24600.4 | TAIR:AT2G24600.4 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | UniProt:F4IPR3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_001189592.1 |
| RefSeq:NP_973528.1 | PFAM:PF12796 | PFAM:PF13637 | PFAM:PF13962 | InterPro:PGG_dom | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF18 | SMART:SM00248 |
| SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI0000196C56 | SEG:seg | : | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IPR3]
Coordinates
chr2:-:10452034..10454593
Molecular Weight (calculated)
66575.8 Da
IEP (calculated)
8.606
GRAVY (calculated)
-0.019
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPIFDAILQ NDLPAFLGLV EARESSLEER SEEQNTNNTV LHVAAKLGHR ELVAKIIELR PSLLSSRNAY GDTPLHLAAL LGDVNIVMQM LDTGLELYSA
101: RNNKNQTPLH LAFVSIFMEA AKFIVEKTNS VDLDELNFAL SSGSTCIVGI ILERFPELAR KNAWEVEDGS RSTLLHYACD KGDLELTSIL LGLNQGLEEA
201: LNSKGLSPLH LAVQRGSVII LEEFMDKSPL SFCVRTPSKE TVFHLAARNK NTDAFVFMAE NLGTSSPILL KKKDQQGNTV LHIAASVSCG SPLIRYIVGK
301: KIIDIRDRNN MGYRAYHLLP RQAQDYEFIS SYLRCDTKTS EEVDSKKAER NEPHIGHSEV IRLLKLIEIS TSEIAERKKS KKHHVKRGHK SLEHEMHIEA
401: LQNARNTIAI VAVLIASVSY AGGINPPGGV YQDGPWKGKS LVGNTAAFKV FAICNNIALF TSLCIVILLV SIIPYQRKPL KKLLVATHRM MWVSVGFMAT
501: AYVAASLVTI PHFPGTRWLF PVIISVAGGS LTVLFSYLGV ETISHWFKKM NRVGRGLPIY FIKNNRVEDI PAIAKNEGEM PSLARTNSDL AASEGSGYFT
601: Y
101: RNNKNQTPLH LAFVSIFMEA AKFIVEKTNS VDLDELNFAL SSGSTCIVGI ILERFPELAR KNAWEVEDGS RSTLLHYACD KGDLELTSIL LGLNQGLEEA
201: LNSKGLSPLH LAVQRGSVII LEEFMDKSPL SFCVRTPSKE TVFHLAARNK NTDAFVFMAE NLGTSSPILL KKKDQQGNTV LHIAASVSCG SPLIRYIVGK
301: KIIDIRDRNN MGYRAYHLLP RQAQDYEFIS SYLRCDTKTS EEVDSKKAER NEPHIGHSEV IRLLKLIEIS TSEIAERKKS KKHHVKRGHK SLEHEMHIEA
401: LQNARNTIAI VAVLIASVSY AGGINPPGGV YQDGPWKGKS LVGNTAAFKV FAICNNIALF TSLCIVILLV SIIPYQRKPL KKLLVATHRM MWVSVGFMAT
501: AYVAASLVTI PHFPGTRWLF PVIISVAGGS LTVLFSYLGV ETISHWFKKM NRVGRGLPIY FIKNNRVEDI PAIAKNEGEM PSLARTNSDL AASEGSGYFT
601: Y
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.