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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17652 Canola cytosol 93.05 92.87
Bra024863.1-P Field mustard cytosol 92.67 92.5
CDY36249 Canola cytosol 92.86 92.34
KRH60413 Soybean cytosol 71.62 71.89
VIT_01s0011g05700.t01 Wine grape cytosol 71.62 71.62
KRH41712 Soybean cytosol 69.92 70.45
Solyc01g005340.2.1 Tomato plasma membrane 69.17 70.36
PGSC0003DMT400051426 Potato plasma membrane 69.17 70.36
Zm00001d051244_P001 Maize cytosol 15.79 68.29
KRH49636 Soybean cytosol 66.54 67.43
KRH70344 Soybean cytosol, peroxisome, plasma membrane 65.98 66.86
GSMUA_Achr5P05930_001 Banana cytosol, plasma membrane 64.1 65.7
Os02t0735700-01 Rice plasma membrane 60.53 61.22
Zm00001d017959_P001 Maize plasma membrane 59.21 59.89
TraesCS6B01G327600.1 Wheat cytosol 59.02 59.81
TraesCS6D01G277900.1 Wheat cytosol, plasma membrane 58.83 59.62
EES07299 Sorghum cytosol, plasma membrane 59.02 59.36
Zm00001d051806_P001 Maize cytosol, plasma membrane 58.65 59.32
Zm00001d005701_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 32.33 55.13
Zm00001d025440_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 32.33 55.13
Zm00001d033803_P001 Maize plasma membrane, vacuole 32.14 54.81
AT1G07710.1 Thale cress cytosol, peroxisome, plasma membrane 41.73 40.88
AT5G60070.1 Thale cress cytosol, plastid 40.04 38.87
Zm00001d030264_P001 Maize plastid 19.17 38.35
AT5G02620.5 Thale cress cytosol 39.29 38.21
AT3G12360.1 Thale cress cytosol 39.29 35.42
AT1G05640.1 Thale cress cytosol 41.35 35.09
AT2G31820.1 Thale cress cytosol, nucleus, plasma membrane 41.92 33.69
AT3G09550.2 Thale cress cytosol, nucleus, plasma membrane 37.97 32.9
AT1G34050.1 Thale cress cytosol, peroxisome, plasma membrane 20.49 19.02
AT5G54710.2 Thale cress cytosol 21.62 17.88
AT5G50140.1 Thale cress plasma membrane 17.11 17.01
AT1G10340.1 Thale cress cytosol 17.67 16.26
AT2G24600.4 Thale cress cytosol, peroxisome, plasma membrane 18.23 16.14
AT5G54700.1 Thale cress cytosol 14.29 15.83
AT4G03460.1 Thale cress peroxisome 17.48 14.81
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 17.11 14.77
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 16.54 13.5
AT4G05040.1 Thale cress cytosol 14.29 13.29
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 17.48 13.1
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 16.54 12.88
AT4G03450.1 Thale cress plasma membrane 14.85 12.32
AT4G14390.1 Thale cress plasma membrane 15.6 11.96
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 14.66 11.64
AT4G03440.1 Thale cress cytosol 15.79 11.19
AT4G03480.1 Thale cress mitochondrion 13.35 10.77
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1EntrezGene:814697UniProt:A0A178VS18ProteinID:AAD12703.1ProteinID:AEC05484.1
ArrayExpress:AT2G01680EnsemblPlantsGene:AT2G01680RefSeq:AT2G01680TAIR:AT2G01680RefSeq:AT2G01680-TAIR-GEnsemblPlants:AT2G01680.1
TAIR:AT2G01680.1EMBL:AY084921InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfInterPro:At2g01680/At5g02620
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:IPR002110InterPro:IPR020683
InterPro:IPR036770RefSeq:NP_565274.1ProteinID:OAP07863.1PFAM:PF00023PFAM:PF12796PFAM:PF13962
InterPro:PGG_domPO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PFscan:PS50088PFscan:PS50297PANTHER:PTHR24186PANTHER:PTHR24186:SF10UniProt:Q9ZU96
SMART:SM00248SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI00000A7FFDSEG:seg:
Description
Ankyrin repeat-containing protein At2g01680 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU96]
Coordinates
chr2:+:306251..309267
Molecular Weight (calculated)
58836.1 Da
IEP (calculated)
8.861
GRAVY (calculated)
0.017
Length
532 amino acids
Sequence
(BLAST)
001: MEMKQMKFLT HQAFFSSVRS GDLSQLQQLV DNLTGDELID ESSPCSAVAE LMSVQNDAGE TAVYISAAEN LEDIFRYLIR FSSLETVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLRLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPSCAMIVRK NGKTSLHTAG RYGLLRIVKA LIEKDAAIVG VKDKKGQTAL
201: HMAVKGRSLE VVEEILQADY TILNERDRKG NTALHIATRK ARPQITSLLL TFTAIEVNAI NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTEG SHVGQANIAG RTGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITITLL GAPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSSKSFS WSYSHHVSDF EDESDFEKII AL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.