Factsheet for Solyc01g005340.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051426	Potato	plasma membrane	99.04	99.04
VIT_01s0011g05700.t01	Wine grape	cytosol	77.25	75.94
KRH60413	Soybean	cytosol	75.72	74.72
KRH41712	Soybean	cytosol	74.57	73.86
KRH49636	Soybean	cytosol	71.13	70.86
Zm00001d051244_P001	Maize	cytosol	16.63	70.73
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	70.94	70.67
Bra024863.1-P	Field mustard	cytosol	71.13	69.79
CDY17652	Canola	cytosol	71.13	69.79
AT2G01680.1	Thale cress	cytosol, plasma membrane	70.36	69.17
CDY36249	Canola	cytosol	70.55	68.97
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	66.54	67.05
Os02t0735700-01	Rice	plasma membrane	64.44	64.07
Zm00001d017959_P001	Maize	plasma membrane	64.44	64.07
Zm00001d051806_P001	Maize	cytosol, plasma membrane	63.86	63.5
EES07299	Sorghum	cytosol, plasma membrane	64.05	63.33
TraesCS6B01G327600.1	Wheat	cytosol	62.72	62.48
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	62.33	62.1
Zm00001d025440_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	34.8	58.33
Zm00001d005701_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	34.8	58.33
Zm00001d033803_P001	Maize	plasma membrane, vacuole	34.61	58.01
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.55	43.55
Solyc11g072960.1.1	Tomato	cytosol	44.17	43.5
Solyc08g014570.2.1	Tomato	cytosol, peroxisome, plasma membrane	45.7	42.53
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.06	40.67
Solyc12g019060.1.1	Tomato	cytosol	43.59	40.0
Solyc06g005240.2.1	Tomato	cytosol	34.42	40.0
Solyc05g054830.2.1	Tomato	nucleus	43.98	39.38
Solyc12g096670.1.1	Tomato	cytosol	42.64	38.85
Zm00001d030264_P001	Maize	plastid	19.5	38.35
Solyc10g084550.1.1	Tomato	plastid	39.77	35.56
Solyc08g066770.2.1	Tomato	cytosol	25.43	21.91
Solyc07g061760.1.1	Tomato	cytosol	9.94	19.4
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	18.36	18.57
Solyc07g061750.2.1	Tomato	cytosol	18.36	16.55

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K4ASA1
PFAM:PF00023	PFAM:PF12796	PFAM:PF13637	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403	EnsemblPlantsGene:Solyc01g005340.2
EnsemblPlants:Solyc01g005340.2.1	TMHMM:TMhelix	UniParc:UPI0002761AC4	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:-:241288..245649

Molecular Weight (calculated)

57282.3 Da

IEP (calculated)

8.607

GRAVY (calculated)

0.133

Length

523 amino acids

Sequence
(BLAST)

001: MDSKSLRLIT HQSFFSAVGS GDLESLKIII KNDGLDLFSL LALQNDAGET ALYIAVSNNY EEIVSYLLGF CNLETAMIRS KADFDAFHVA AKSGHLGIVR
101: ELLAMWPGLC KVCNSSNTSP LYSAAVKGHL DVVNAILDAD VSSIRIVRKN GKTALHTTAR YGLLHIVKAL IERDPDIISI KDKKGQTALH MAVKGQDTFV
201: VEEMLDTDSS ILNERDKKGN TALHIATRKC RPQIVSLLLS YTSLDVNAIN NQKETAMDLA DKLQYGDSAL LIKEGLTEAG AKHARFVGQF DEASELKRTV
301: SDIKHEVQSQ LIQNEKTRRR VSGIAKELRK IHREAVQNTI NSVTVVAVLF ASIAFLAIFS LPGQYVETGP EAGKARIADT VAFRVFCLLN ATSLFISLAV
401: VVVQITLVAW DTRAQKQIVS VVNKLMWAAC VSTCGAFLAV GFVVVGRKSS WMAITITVLG APILIGTLVS LCYFVFRQHF GICGSDSQRR IRRASGSKSF
501: SWSHSANISD MDDYNSDDRI YAL

Best Arabidopsis Sequence Match ( AT2G01680.1 )
(BLAST)

001: MEMKQMKFLT HQAFFSSVRS GDLSQLQQLV DNLTGDELID ESSPCSAVAE LMSVQNDAGE TAVYISAAEN LEDIFRYLIR FSSLETVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLRLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPSCAMIVRK NGKTSLHTAG RYGLLRIVKA LIEKDAAIVG VKDKKGQTAL
201: HMAVKGRSLE VVEEILQADY TILNERDRKG NTALHIATRK ARPQITSLLL TFTAIEVNAI NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTEG SHVGQANIAG RTGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITITLL GAPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSSKSFS WSYSHHVSDF EDESDFEKII AL

Arabidopsis Description

Ankyrin repeat-containing protein At2g01680 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU96]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.