Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024863.1-P | Field mustard | cytosol | 99.44 | 99.44 |
| CDY36249 | Canola | cytosol | 99.06 | 98.69 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 92.87 | 93.05 |
| KRH60413 | Soybean | cytosol | 72.42 | 72.83 |
| VIT_01s0011g05700.t01 | Wine grape | cytosol | 71.67 | 71.8 |
| KRH41712 | Soybean | cytosol | 70.92 | 71.59 |
| Solyc01g005340.2.1 | Tomato | plasma membrane | 69.79 | 71.13 |
| PGSC0003DMT400051426 | Potato | plasma membrane | 69.79 | 71.13 |
| Zm00001d051244_P001 | Maize | cytosol | 15.95 | 69.11 |
| KRH70344 | Soybean | cytosol, peroxisome, plasma membrane | 66.98 | 68.0 |
| KRH49636 | Soybean | cytosol | 66.6 | 67.62 |
| GSMUA_Achr5P05930_001 | Banana | cytosol, plasma membrane | 62.85 | 64.55 |
| Os02t0735700-01 | Rice | plasma membrane | 59.85 | 60.65 |
| Zm00001d017959_P001 | Maize | plasma membrane | 59.29 | 60.08 |
| TraesCS6D01G277900.1 | Wheat | cytosol, plasma membrane | 58.91 | 59.81 |
| TraesCS6B01G327600.1 | Wheat | cytosol | 58.91 | 59.81 |
| EES07299 | Sorghum | cytosol, plasma membrane | 58.91 | 59.36 |
| Zm00001d051806_P001 | Maize | cytosol, plasma membrane | 58.54 | 59.32 |
| Zm00001d025440_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 32.08 | 54.81 |
| Zm00001d005701_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 32.08 | 54.81 |
| Zm00001d033803_P001 | Maize | plasma membrane, vacuole | 31.89 | 54.49 |
| CDX93618 | Canola | cytosol | 25.33 | 46.88 |
| CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 21.01 | 46.67 |
| CDX95126 | Canola | cytosol | 41.84 | 41.3 |
| CDY58363 | Canola | cytosol | 41.46 | 39.75 |
| CDY15549 | Canola | cytosol | 41.09 | 39.25 |
| CDX88738 | Canola | plastid | 39.21 | 38.99 |
| CDY10435 | Canola | cytosol | 38.27 | 38.71 |
| CDX71059 | Canola | plastid | 39.4 | 38.46 |
| CDY70132 | Canola | cytosol | 37.9 | 38.33 |
| Zm00001d030264_P001 | Maize | plastid | 18.95 | 37.97 |
| CDY42145 | Canola | cytosol | 39.4 | 35.9 |
| CDY50551 | Canola | cytosol | 39.4 | 35.65 |
| CDY50335 | Canola | cytosol | 39.21 | 35.48 |
| CDY19113 | Canola | cytosol | 41.65 | 35.18 |
| CDX99605 | Canola | cytosol | 18.76 | 35.09 |
| CDX73200 | Canola | cytosol | 19.7 | 34.77 |
| CDY59983 | Canola | cytosol | 19.7 | 34.77 |
| CDY07932 | Canola | nucleus, plastid | 38.84 | 34.56 |
| CDX86566 | Canola | cytosol | 37.34 | 34.49 |
| CDX73985 | Canola | nucleus | 38.65 | 33.83 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 39.4 | 33.76 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 37.71 | 32.06 |
| CDY08436 | Canola | cytosol | 39.59 | 31.97 |
| CDY58683 | Canola | cytosol | 10.88 | 19.02 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 18.2 | 17.2 |
| CDY39673 | Canola | plasma membrane | 19.32 | 17.17 |
| CDY20943 | Canola | cytosol | 18.39 | 17.04 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 18.01 | 16.99 |
| CDY69308 | Canola | plasma membrane | 18.76 | 16.86 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 14.26 | 16.59 |
| CDY20635 | Canola | plasma membrane | 17.82 | 16.3 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 17.45 | 16.09 |
| CDY40662 | Canola | plasma membrane | 17.07 | 15.77 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 17.45 | 15.76 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 16.89 | 15.6 |
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 4.5 | 15.48 |
| CDY48208 | Canola | cytosol | 17.82 | 15.25 |
| CDY35767 | Canola | cytosol, peroxisome, plasma membrane | 16.89 | 14.71 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 17.64 | 14.53 |
| CDY45914 | Canola | cytosol | 11.26 | 13.67 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 16.32 | 12.32 |
| CDY21967 | Canola | plasma membrane | 16.14 | 11.39 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 14.26 | 10.73 |
| CDY21969 | Canola | nucleus | 5.07 | 8.06 |
| CDY16446 | Canola | cytosol | 0.19 | 7.14 |
| CDY20642 | Canola | nucleus | 15.95 | 5.96 |
| CDY58682 | Canola | cytosol | 0.38 | 2.38 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | GO:A0A078FY09 | UniProt:A0A078FY09 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:At2g01680/At5g02620 | EnsemblPlants:CDY17652 | ProteinID:CDY17652 | ProteinID:CDY17652.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00001867001 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF00023 | PFAM:PF12796 |
| PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24186 | PANTHER:PTHR24186:SF10 |
| SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI0004EE5A10 | SEG:seg | : |
Description
BnaA06g34710DBnaA06g34710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FY09]
Coordinates
chrLK032076:-:354702..357344
Molecular Weight (calculated)
58587.6 Da
IEP (calculated)
8.320
GRAVY (calculated)
0.033
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKQMRFLT HQAFFSSVRS GDLNQLQELV EKLTGDELID ESSPSSAVSE LMSVQNDAGE TAVYIAAAEN LQDVFSYLIT FCSLEAVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLSLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDA DPSCAMIVRK NGKTSLHTAG RYGLLRIVRA LIERDAAIVG VKDKKGQTAL
201: HMAVKGQSVE VVEEILQADY SILNDRDRKG NTALHIATRK CRPQITSLLL TFTAIEVNAV NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTDG SRAGKAEISG STGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITVTVL GMPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSGSRSF SWSYSAHVSD FEDESDFEKI IAL
101: AAKRGHLGIV KELLSLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDA DPSCAMIVRK NGKTSLHTAG RYGLLRIVRA LIERDAAIVG VKDKKGQTAL
201: HMAVKGQSVE VVEEILQADY SILNDRDRKG NTALHIATRK CRPQITSLLL TFTAIEVNAV NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTDG SRAGKAEISG STGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITVTVL GMPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSGSRSF SWSYSAHVSD FEDESDFEKI IAL
001: MEMKQMKFLT HQAFFSSVRS GDLSQLQQLV DNLTGDELID ESSPCSAVAE LMSVQNDAGE TAVYISAAEN LEDIFRYLIR FSSLETVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLRLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPSCAMIVRK NGKTSLHTAG RYGLLRIVKA LIEKDAAIVG VKDKKGQTAL
201: HMAVKGRSLE VVEEILQADY TILNERDRKG NTALHIATRK ARPQITSLLL TFTAIEVNAI NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTEG SHVGQANIAG RTGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITITLL GAPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSSKSFS WSYSHHVSDF EDESDFEKII AL
101: AAKRGHLGIV KELLRLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPSCAMIVRK NGKTSLHTAG RYGLLRIVKA LIEKDAAIVG VKDKKGQTAL
201: HMAVKGRSLE VVEEILQADY TILNERDRKG NTALHIATRK ARPQITSLLL TFTAIEVNAI NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTEG SHVGQANIAG RTGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITITLL GAPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSSKSFS WSYSHHVSDF EDESDFEKII AL
Arabidopsis Description
Ankyrin repeat-containing protein At2g01680 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU96]
SUBAcon: [plasma membrane,cytosol]
SUBAcon: [plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.