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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58363 Canola cytosol 87.0 98.74
Bra021752.1-P Field mustard cytosol 99.05 96.01
CDY42071 Canola cytosol, nucleus, plasma membrane, plastid 86.53 87.78
CDY34515 Canola cytosol, nucleus, plasma membrane, plastid 86.85 87.4
CDY15549 Canola cytosol 76.86 86.92
CDX86566 Canola cytosol 71.16 77.82
KRG97307 Soybean cytosol 66.88 75.63
KRH69034 Soybean cytosol 67.04 74.73
VIT_05s0094g01320.t01 Wine grape cytosol 68.46 73.97
KRH27553 Soybean cytosol, peroxisome, plasma membrane 29.48 73.23
Solyc12g019060.1.1 Tomato cytosol 63.39 70.18
Solyc12g096670.1.1 Tomato cytosol 63.39 69.69
PGSC0003DMT400052568 Potato cytosol 62.92 69.53
PGSC0003DMT400075256 Potato cytosol 61.49 68.92
PGSC0003DMT400064924 Potato cytosol 59.75 68.42
Solyc08g014570.2.1 Tomato cytosol, peroxisome, plasma membrane 60.38 67.79
GSMUA_Achr7P23720_001 Banana cytosol, peroxisome, plasma membrane 24.72 66.67
KRH64845 Soybean cytosol 57.53 65.64
TraesCS7D01G268900.1 Wheat cytosol 54.36 62.36
TraesCS7B01G166600.1 Wheat cytosol 54.2 62.18
HORVU7Hr1G056430.1 Barley cytosol 54.2 62.07
GSMUA_Achr11P... Banana cytosol, mitochondrion, peroxisome, plasma membrane 56.74 62.05
TraesCS7A01G265800.1 Wheat cytosol 53.88 61.82
Os08t0542700-01 Rice cytosol 54.04 61.22
EES15259 Sorghum cytosol 54.52 61.21
EER97054 Sorghum cytosol 54.04 60.68
Zm00001d031706_P001 Maize cytosol 53.88 60.61
Zm00001d006142_P002 Maize cytosol 53.88 60.5
Zm00001d006147_P002 Maize cytosol 53.88 60.5
TraesCS5B01G305700.1 Wheat cytosol 53.57 59.82
Os09t0518500-01 Rice cytosol 53.25 59.79
Zm00001d021169_P002 Maize cytosol 54.2 59.69
TraesCS5D01G312200.1 Wheat cytosol 53.41 59.65
HORVU5Hr1G079730.3 Barley cytosol 53.25 59.47
TraesCS5A01G305200.1 Wheat cytosol 52.93 59.12
CDX93618 Canola cytosol 26.47 57.99
CDY55069 Canola cytosol, peroxisome, plasma membrane 21.87 57.5
GSMUA_Achr11P... Banana cytosol, mitochondrion, plasma membrane, plastid 57.69 56.0
CDX88738 Canola plastid 47.54 55.97
CDX95126 Canola cytosol 47.86 55.93
GSMUA_Achr7P23730_001 Banana cytosol 28.05 55.84
CDX71059 Canola plastid 48.02 55.49
CDY10435 Canola cytosol 42.95 51.42
CDY70132 Canola cytosol 42.63 51.04
CDX73200 Canola cytosol 21.08 44.04
CDX99605 Canola cytosol 19.81 43.86
CDY59983 Canola cytosol 20.76 43.38
CDY17652 Canola cytosol 35.18 41.65
CDY36249 Canola cytosol 35.02 41.31
CDY50335 Canola cytosol 37.24 39.9
CDY50551 Canola cytosol 37.24 39.9
CDY42145 Canola cytosol 36.93 39.83
CDY07932 Canola nucleus, plastid 37.4 39.4
CDX73985 Canola nucleus 37.56 38.92
CDY08436 Canola cytosol 37.08 35.45
CDY58683 Canola cytosol 10.78 22.3
CDY16445 Canola cytosol, plasma membrane, plastid 19.33 21.59
CDY39673 Canola plasma membrane 20.29 21.33
CDY45915 Canola extracellular, plasma membrane, plastid, vacuole 5.23 21.29
CDY69308 Canola plasma membrane 19.97 21.25
CDY20943 Canola cytosol 19.33 21.22
CDY20635 Canola plasma membrane 19.49 21.1
CDY20639 Canola cytosol, peroxisome, plasma membrane 14.74 20.31
CDY18182 Canola cytosol, peroxisome, plasma membrane 17.91 20.04
CDX74181 Canola cytosol, peroxisome, plasma membrane 17.27 18.86
CDY40662 Canola plasma membrane 16.64 18.2
CDY40658 Canola cytosol, peroxisome, plasma membrane 16.64 18.2
CDY30009 Canola cytosol, plasma membrane, plastid 16.8 17.97
CDY48208 Canola cytosol 17.59 17.82
CDY35767 Canola cytosol, peroxisome, plasma membrane 16.96 17.48
CDY58682 Canola cytosol 2.22 16.67
CDY42176 Canola cytosol, peroxisome, plasma membrane 16.96 16.54
CDY45914 Canola cytosol 10.94 15.72
CDY48209 Canola cytosol, peroxisome, plasma membrane 17.12 15.3
CDY21967 Canola plasma membrane 17.75 14.83
CDY48563 Canola cytosol, nucleus, plasma membrane, plastid 15.53 13.84
CDY21969 Canola nucleus 5.39 10.15
CDY16446 Canola cytosol 0.16 7.14
CDY20642 Canola nucleus 15.21 6.73
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1GO:A0A078G381UniProt:A0A078G381InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfEnsemblPlants:CDY19113ProteinID:CDY19113ProteinID:CDY19113.1ncoils:CoilGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00006392001
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770PFAM:PF12796PFAM:PF13962InterPro:PGG_dom
PFscan:PS50088PFscan:PS50297PANTHER:PTHR24186PANTHER:PTHR24186:SF8SMART:SM00248SUPFAM:SSF48403
TMHMM:TMhelixUniParc:UPI0004EEF6D1SEG:seg:::
Description
BnaA04g18530DBnaA04g18530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G381]
Coordinates
chrLK032092:+:296657..299653
Molecular Weight (calculated)
69263.4 Da
IEP (calculated)
9.888
GRAVY (calculated)
-0.168
Length
631 amino acids
Sequence
(BLAST)
001: MTIMEEKQSS PVSEKQQSFN QTEPKEKQHS FGCAETNQPR KARALEKQVS FQGVNVQPKT WEVMEKLPSF GKAPSMERQK SFRGGFLEKQ KSFRVVMERQ
101: LSFIGERRKK TESPGKRGDS PLHIAARTGN LGKVKELIRG SSCGEELREL LSKQNLEGET PLYTAAENGH SFVVEEMLKH MCLETGSIAA RNGFDPFHVA
201: AKQGHLEVLK KLLETFPNLA MTTDLSCTTA LHTAATQGHI DVVNLLLETD SNLAKIAKNN GKTALHSAAR MGHVDVVKSL IGNDPSIGFR TDKKGQTALH
301: MAVKGQNDEI VVELVKPDVA VLSVEDNKGN TPLHIATNKG RVKIVQCLVS FEGINLNPIN KAGDTPLDIA EKIGNGELVS VLKEAGAATA KDLGKPQNPA
401: KQLKQTVSDI KHEVQSQLQQ SRQTGVRVQK IAKRLKKLHI SGLNNAINSA TVVAVLIATV AFAAIFTIPG QYEEDPSKGA LLGQAHIANR APFLVFFIFD
501: SLALFISLAV VVVQTSVVVI EQKAKKKLVF VINKLMWCAC LFISIAFVSL SYIVVGKEDM WLAVCATVIG GTIMLPTIGA MCYCVVMHRM EESKLRSIRK
601: ERSKSQSFSM SRMASDSEIL NGEYNKRMYA L
Best Arabidopsis Sequence Match ( AT2G31820.1 )
(BLAST)
001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.