CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55069	Canola	cytosol, peroxisome, plasma membrane	69.44	83.33
CDX99605	Canola	cytosol	61.46	62.11
CDY59983	Canola	cytosol	64.93	61.92
CDX73200	Canola	cytosol	64.93	61.92
Bra018683.1-P	Field mustard	cytosol	100.0	53.43
CDX95126	Canola	cytosol	98.26	52.41
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	95.14	50.46
PGSC0003DMT400078144	Potato	cytosol	74.65	40.19
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	74.31	40.0
TraesCS4B01G202300.1	Wheat	cytosol	70.14	37.41
TraesCS4D01G203200.1	Wheat	cytosol	69.79	37.22
GSMUA_Achr8P02120_001	Banana	cytosol	68.4	36.62
CDX71059	Canola	plastid	69.1	36.45
CDX88738	Canola	plastid	67.01	36.01
Solyc06g005240.2.1	Tomato	cytosol	56.25	36.0
TraesCS4A01G102300.1	Wheat	cytosol	68.06	35.9
Solyc11g072960.1.1	Tomato	cytosol	63.54	34.46
Os03t0281100-00	Rice	cytosol	67.36	34.34
PGSC0003DMT400040191	Potato	cytosol	63.89	34.33
PGSC0003DMT400025094	Potato	cytosol	63.54	33.89
CDY10435	Canola	cytosol	61.11	33.4
CDY70132	Canola	cytosol	61.11	33.4
Zm00001d028680_P001	Maize	cytosol	64.58	33.1
GSMUA_Achr6P33230_001	Banana	cytosol	68.06	33.05
HORVU4Hr1G058450.9	Barley	plastid	69.79	32.68
EER95066	Sorghum	cytosol	63.89	32.45
CDY15549	Canola	cytosol	58.33	30.11
CDY58363	Canola	cytosol	57.64	29.86
CDX86566	Canola	cytosol	58.68	29.29
GSMUA_Achr9P04150_001	Banana	plasma membrane	66.32	29.03
CDY19113	Canola	cytosol	57.99	26.47
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	56.94	26.37
CDY17652	Canola	cytosol	46.88	25.33
CDY36249	Canola	cytosol	46.88	25.23
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	53.82	24.72
CDY42145	Canola	cytosol	47.57	23.42
CDY50551	Canola	cytosol	47.57	23.26
CDY50335	Canola	cytosol	47.57	23.26
CDY07932	Canola	nucleus, plastid	45.49	21.87
CDX73985	Canola	nucleus	45.49	21.51
CDY08436	Canola	cytosol	47.57	20.76
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	11.11	20.65
CDY20639	Canola	cytosol, peroxisome, plasma membrane	22.22	13.97
CDY39673	Canola	plasma membrane	25.69	12.33
CDY20943	Canola	cytosol	24.31	12.17
CDY69308	Canola	plasma membrane	23.96	11.64
CDY48208	Canola	cytosol	25.0	11.56
CDY58683	Canola	cytosol	12.15	11.48
CDY16445	Canola	cytosol, plasma membrane, plastid	22.22	11.33
CDY20635	Canola	plasma membrane	22.92	11.32
CDY35767	Canola	cytosol, peroxisome, plasma membrane	23.96	11.27
CDY18182	Canola	cytosol, peroxisome, plasma membrane	21.88	11.17
CDX74181	Canola	cytosol, peroxisome, plasma membrane	21.53	10.73
CDY40662	Canola	plasma membrane	21.18	10.57
CDY30009	Canola	cytosol, plasma membrane, plastid	21.53	10.51
CDY40658	Canola	cytosol, peroxisome, plasma membrane	20.83	10.4
CDY42176	Canola	cytosol, peroxisome, plasma membrane	20.83	9.27
CDY21967	Canola	plasma membrane	22.22	8.48
CDY48209	Canola	cytosol, peroxisome, plasma membrane	20.14	8.22
CDY45914	Canola	cytosol	10.42	6.83
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	16.32	6.64
CDY20642	Canola	nucleus	25.0	5.05
CDY58682	Canola	cytosol	0.0	0.0
CDY16446	Canola	cytosol	0.0	0.0
CDY21969	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	GO:A0A078E288	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:At2g01680/At5g02620	EnsemblPlants:CDX93618	ProteinID:CDX93618	ProteinID:CDX93618.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00156298001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0004EE0551	SEG:seg	:

Description

BnaA06g04300D

Coordinates

chrLK031876:-:956486..957526

Molecular Weight (calculated)

31234.1 Da

IEP (calculated)

7.558

GRAVY (calculated)

0.293

Length

288 amino acids

Sequence
(BLAST)

001: MDKKGQTALH MAAKGTNVEV VEELIKADRS SINIADTKGN TALHIAARKG RSQIVKLLLD NNITDTKAVN RTGETALDTA EKVGNPELNK MHTEGLNNAI
101: NSTTVVAVLI ATVAFAAIFT VPGQYVEDIT NLPDGHSLGE ANIASTTPFI IFFIFDSIAL FISLAVVVVQ TSVVVIESKA KKQMMAVINK LMWLACVLIS
201: VAFLALSFVV VGEEEKWLAI WVTAIGATIM ITTLGTMCYW IIQHKIEAAN ARNIRRSSIN NSKSGSWGIP QLTDTDVLQN ECKKMYAI

Best Arabidopsis Sequence Match ( AT1G05640.1 )
(BLAST)

001: MSSLVPVMEK QESVRGNSVE EQQSLRCVGA ENQVRKGRAL DKQVSFLAVN VVEKHGIKGR AMEKQERAME RQRSFRGFVE KQKSFRVVME RQLSFMNVGG
101: ERKKKTDSPG KRGDSPLHLA ARTGNLGKVM ELIRACNGIE ELKELSSKQN LEGETPLYSA AENGHSLVVE EMLKHMDLDT ASVKARNGFD PFHVAAKQGH
201: IEALKKLLET FPNLAMTVDL SCTTALHTAA SQGHTDVVNL LLKTDSHLAK IAKNNGKTAL HSAARMGHRE VVKSLIGNDA SIGFRTDKKG QTALHMAVKG
301: QNEGIVLELV KPDPAILSVE DSKGNTPLHT ATNKGRIKIV RCLVSFDGIN LNAMNKAGDT ALDIAEKIGN PELVSVLKEA GAATAKDLGK PRNPAKQLNQ
401: TVSDIKHEVQ SQLQQSRQTG VRVRRIAKRL KKLHINGLNN AINSATVVAV LIATVAFAAI FTIPGQYEED RTKGLLLLGE ARIAGKAPFL VFFIFDSLAL
501: FISLAVVVVQ TSVVVIEQKA KKNLVFVINK LMWLACLFIS VAFVSLSFIV VGKEDIWLAI CATIIGGTIM LTTIGAMCYC VVMHRIEESK LKSLRKERSK
601: SKSFSLSHMP SESEILNGEF NKRMYAL

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SYK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.