Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034760.1-P | Field mustard | cytosol | 99.32 | 99.32 |
| CDY50551 | Canola | cytosol | 96.58 | 95.93 |
| AT3G12360.1 | Thale cress | cytosol | 96.41 | 95.59 |
| CDY50335 | Canola | cytosol | 96.24 | 95.59 |
| CDY08436 | Canola | cytosol | 99.49 | 88.18 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 78.63 | 78.1 |
| KRG92972 | Soybean | cytosol | 77.78 | 77.78 |
| KRH36223 | Soybean | cytosol | 78.12 | 77.2 |
| GSMUA_Achr11P... | Banana | cytosol | 64.44 | 76.78 |
| GSMUA_Achr9P04170_001 | Banana | cytosol | 66.5 | 76.27 |
| GSMUA_Achr5P07190_001 | Banana | cytosol | 68.38 | 76.05 |
| GSMUA_Achr7P15350_001 | Banana | cytosol, plastid | 70.94 | 74.37 |
| GSMUA_Achr6P33220_001 | Banana | cytosol | 68.21 | 72.94 |
| GSMUA_Achr6P34410_001 | Banana | cytosol | 63.25 | 72.55 |
| CDY07932 | Canola | nucleus, plastid | 71.79 | 70.12 |
| CDX73985 | Canola | nucleus | 71.79 | 68.97 |
| Zm00001d042948_P001 | Maize | cytosol | 61.71 | 64.81 |
| EES03848 | Sorghum | cytosol | 61.37 | 64.57 |
| Os01t0837000-01 | Rice | cytosol | 61.2 | 64.39 |
| HORVU3Hr1G087050.1 | Barley | cytosol | 60.85 | 64.38 |
| TraesCS3A01G354800.1 | Wheat | cytosol | 61.03 | 64.32 |
| TraesCS3B01G387800.2 | Wheat | cytosol | 60.68 | 64.08 |
| TraesCS3D01G348800.2 | Wheat | cytosol | 60.51 | 63.78 |
| EER95067 | Sorghum | cytosol, nucleus, plasma membrane | 72.99 | 62.06 |
| Os03t0281000-01 | Rice | nucleus, peroxisome, plasma membrane | 72.31 | 62.02 |
| Zm00001d028679_P002 | Maize | cytosol, nucleus, plasma membrane | 72.65 | 61.42 |
| TraesCS4B01G202400.2 | Wheat | cytosol, nucleus, plasma membrane | 72.82 | 61.38 |
| Zm00001d047772_P002 | Maize | plastid | 72.99 | 61.35 |
| HORVU4Hr1G058480.2 | Barley | cytosol, nucleus, plasma membrane | 72.82 | 61.3 |
| TraesCS4D01G203300.1 | Wheat | cytosol, nucleus, plasma membrane | 72.99 | 60.4 |
| TraesCS4A01G102200.2 | Wheat | nucleus | 72.65 | 58.86 |
| CDX93618 | Canola | cytosol | 23.42 | 47.57 |
| CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 19.15 | 46.67 |
| CDX88738 | Canola | plastid | 41.71 | 45.52 |
| CDX71059 | Canola | plastid | 41.88 | 44.87 |
| CDX95126 | Canola | cytosol | 40.51 | 43.89 |
| CDY10435 | Canola | cytosol | 37.61 | 41.75 |
| CDY58363 | Canola | cytosol | 39.49 | 41.55 |
| CDY70132 | Canola | cytosol | 37.09 | 41.18 |
| CDY15549 | Canola | cytosol | 38.97 | 40.86 |
| CDY36249 | Canola | cytosol | 36.07 | 39.44 |
| CDY17652 | Canola | cytosol | 35.9 | 39.4 |
| CDY19113 | Canola | cytosol | 39.83 | 36.93 |
| GSMUA_Achr9P03090_001 | Banana | cytosol | 52.14 | 36.44 |
| CDX86566 | Canola | cytosol | 35.21 | 35.7 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 37.27 | 35.05 |
| CDX73200 | Canola | cytosol | 17.78 | 34.44 |
| CDY59983 | Canola | cytosol | 17.78 | 34.44 |
| CDX99605 | Canola | cytosol | 16.75 | 34.39 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 36.24 | 33.81 |
| CDY16446 | Canola | cytosol | 0.68 | 28.57 |
| CDY58683 | Canola | cytosol | 12.48 | 23.93 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 22.73 | 23.54 |
| CDY69308 | Canola | plasma membrane | 20.17 | 19.9 |
| CDY20943 | Canola | cytosol | 19.49 | 19.83 |
| CDY39673 | Canola | plasma membrane | 20.17 | 19.67 |
| CDY20635 | Canola | plasma membrane | 19.15 | 19.21 |
| CDY58682 | Canola | cytosol | 2.74 | 19.05 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 18.63 | 18.47 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 14.36 | 18.34 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 17.61 | 18.26 |
| CDY48208 | Canola | cytosol | 18.8 | 17.66 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 17.44 | 17.65 |
| CDY40662 | Canola | plasma membrane | 17.09 | 17.33 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 17.09 | 17.33 |
| CDY35767 | Canola | cytosol, peroxisome, plasma membrane | 17.61 | 16.83 |
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 4.44 | 16.77 |
| CDY45914 | Canola | cytosol | 12.31 | 16.4 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 18.12 | 16.38 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 16.92 | 14.02 |
| CDY21967 | Canola | plasma membrane | 16.75 | 12.98 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 15.21 | 12.57 |
| CDY21969 | Canola | nucleus | 5.81 | 10.15 |
| CDY20642 | Canola | nucleus | 14.53 | 5.96 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | GO:A0A078HUH3 | UniProt:A0A078HUH3 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY42145 | ProteinID:CDY42145 | ProteinID:CDY42145.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00074327001 | InterPro:IPR002110 |
| InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF00023 | PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF107 | SMART:SM00248 | SUPFAM:SSF48403 |
| TMHMM:TMhelix | UniParc:UPI0004EF1D27 | SEG:seg | : | : | : |
Description
BnaC05g40740DBnaC05g40740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUH3]
Coordinates
chrLK032516:+:94579..97624
Molecular Weight (calculated)
63440.3 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.144
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSVLDGD IDMEKGGMIL QSSENQDPSP TPSPSATATA PALVLSNSGK RMDQAGKKKY VKQVTGRHND TELHLAAQRG DLAAVQQILK DINSQMEGTL
101: SGEEFDAEVA EIRASIVNEV NELGETALFT AADKGHLDVV KELLKYSSRE SIAKKNRSGY DPLHIAAIQG HHAIVEVLLD HDATLSHTFG PSNATPLVSA
201: AMRGHTEVVN QLLSKAGNLL DISRSNHKNA LHLAARQGHV EVIKALLAKD AHLARRVDKK GQTALHMAVK GQSSEVVKLL LDADPAIVML PDKSCNTALH
301: VATRKKRAEI VELLLSLPDT NANALTRERK TALDIAEGLP LSEESSYIKE CLARRGALRA NELNQPRDEL RSTVTQIKND VHIQLEQTKR TNKNVHNISK
401: ELRKLHREGI NNATNSVTVV AVLFATVAFA AIFTVPGGDN NDGSAVVVGT ASFKIFFIFN AIALFTSLAV VVVQITLVRG ETKAEKRVVE VINKLMWLAS
501: MCTSVAFIAS SYIVVGRKNE WAAELVTVVG GVIMAGVLGT MTYYVVKSKR TRSMRKKVKS ARRSGSNSWH HSDYSNSEVD PIFAI
101: SGEEFDAEVA EIRASIVNEV NELGETALFT AADKGHLDVV KELLKYSSRE SIAKKNRSGY DPLHIAAIQG HHAIVEVLLD HDATLSHTFG PSNATPLVSA
201: AMRGHTEVVN QLLSKAGNLL DISRSNHKNA LHLAARQGHV EVIKALLAKD AHLARRVDKK GQTALHMAVK GQSSEVVKLL LDADPAIVML PDKSCNTALH
301: VATRKKRAEI VELLLSLPDT NANALTRERK TALDIAEGLP LSEESSYIKE CLARRGALRA NELNQPRDEL RSTVTQIKND VHIQLEQTKR TNKNVHNISK
401: ELRKLHREGI NNATNSVTVV AVLFATVAFA AIFTVPGGDN NDGSAVVVGT ASFKIFFIFN AIALFTSLAV VVVQITLVRG ETKAEKRVVE VINKLMWLAS
501: MCTSVAFIAS SYIVVGRKNE WAAELVTVVG GVIMAGVLGT MTYYVVKSKR TRSMRKKVKS ARRSGSNSWH HSDYSNSEVD PIFAI
001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.