Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50551 | Canola | cytosol | 98.47 | 98.47 |
| CDY42145 | Canola | cytosol | 95.59 | 96.24 |
| AT3G12360.1 | Thale cress | cytosol | 95.25 | 95.08 |
| CDY08436 | Canola | cytosol | 95.76 | 85.45 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 77.76 | 77.76 |
| KRG92972 | Soybean | cytosol | 76.91 | 77.44 |
| KRH36223 | Soybean | cytosol | 77.76 | 77.36 |
| GSMUA_Achr11P... | Banana | cytosol | 63.67 | 76.37 |
| GSMUA_Achr5P07190_001 | Banana | cytosol | 67.74 | 75.86 |
| GSMUA_Achr9P04170_001 | Banana | cytosol | 65.53 | 75.69 |
| GSMUA_Achr7P15350_001 | Banana | cytosol, plastid | 70.29 | 74.19 |
| GSMUA_Achr6P33220_001 | Banana | cytosol | 67.91 | 73.13 |
| GSMUA_Achr6P34410_001 | Banana | cytosol | 62.65 | 72.35 |
| CDY07932 | Canola | nucleus, plastid | 70.8 | 69.62 |
| CDX73985 | Canola | nucleus | 71.14 | 68.8 |
| EES03848 | Sorghum | cytosol | 60.78 | 64.39 |
| Zm00001d042948_P001 | Maize | cytosol | 60.78 | 64.27 |
| Os01t0837000-01 | Rice | cytosol | 60.44 | 64.03 |
| HORVU3Hr1G087050.1 | Barley | cytosol | 59.76 | 63.65 |
| TraesCS3A01G354800.1 | Wheat | cytosol | 59.93 | 63.6 |
| TraesCS3B01G387800.2 | Wheat | cytosol | 59.59 | 63.36 |
| TraesCS3D01G348800.2 | Wheat | cytosol | 59.42 | 63.06 |
| Os03t0281000-01 | Rice | nucleus, peroxisome, plasma membrane | 71.14 | 61.44 |
| EER95067 | Sorghum | cytosol, nucleus, plasma membrane | 71.48 | 61.19 |
| Zm00001d047772_P002 | Maize | plastid | 71.82 | 60.78 |
| Zm00001d028679_P002 | Maize | cytosol, nucleus, plasma membrane | 71.14 | 60.55 |
| TraesCS4B01G202400.2 | Wheat | cytosol, nucleus, plasma membrane | 71.31 | 60.52 |
| HORVU4Hr1G058480.2 | Barley | cytosol, nucleus, plasma membrane | 71.14 | 60.29 |
| TraesCS4D01G203300.1 | Wheat | cytosol, nucleus, plasma membrane | 71.65 | 59.69 |
| TraesCS4A01G102200.2 | Wheat | nucleus | 71.14 | 58.03 |
| CDX93618 | Canola | cytosol | 23.26 | 47.57 |
| CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 18.85 | 46.25 |
| CDX88738 | Canola | plastid | 41.26 | 45.34 |
| CDX71059 | Canola | plastid | 41.43 | 44.69 |
| CDX95126 | Canola | cytosol | 40.24 | 43.89 |
| CDY10435 | Canola | cytosol | 37.52 | 41.94 |
| CDY58363 | Canola | cytosol | 39.39 | 41.73 |
| CDY70132 | Canola | cytosol | 37.01 | 41.37 |
| CDY15549 | Canola | cytosol | 38.37 | 40.5 |
| CDY36249 | Canola | cytosol | 35.82 | 39.44 |
| CDY17652 | Canola | cytosol | 35.48 | 39.21 |
| CDY19113 | Canola | cytosol | 39.9 | 37.24 |
| GSMUA_Achr9P03090_001 | Banana | cytosol | 51.27 | 36.08 |
| CDX86566 | Canola | cytosol | 34.63 | 35.36 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 36.67 | 34.73 |
| CDX73200 | Canola | cytosol | 17.49 | 34.11 |
| CDY59983 | Canola | cytosol | 17.49 | 34.11 |
| CDX99605 | Canola | cytosol | 16.47 | 34.04 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 35.65 | 33.49 |
| CDY16446 | Canola | cytosol | 0.68 | 28.57 |
| CDY58683 | Canola | cytosol | 12.73 | 24.59 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 22.58 | 23.54 |
| CDY20943 | Canola | cytosol | 19.52 | 20.0 |
| CDY69308 | Canola | plasma membrane | 20.03 | 19.9 |
| CDY39673 | Canola | plasma membrane | 20.2 | 19.83 |
| CDY20635 | Canola | plasma membrane | 19.35 | 19.55 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 17.83 | 18.62 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 18.51 | 18.47 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 14.26 | 18.34 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 17.66 | 17.99 |
| CDY58682 | Canola | cytosol | 2.55 | 17.86 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 17.49 | 17.85 |
| CDY40662 | Canola | plasma membrane | 17.49 | 17.85 |
| CDY48208 | Canola | cytosol | 18.68 | 17.66 |
| CDY35767 | Canola | cytosol, peroxisome, plasma membrane | 17.49 | 16.83 |
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 4.41 | 16.77 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 18.17 | 16.54 |
| CDY45914 | Canola | cytosol | 12.22 | 16.4 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 16.81 | 14.02 |
| CDY21967 | Canola | plasma membrane | 16.98 | 13.24 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 15.45 | 12.85 |
| CDY21969 | Canola | nucleus | 5.6 | 9.85 |
| CDY20642 | Canola | nucleus | 14.94 | 6.17 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | GO:A0A078IHB8 | UniProt:A0A078IHB8 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY50335 | ProteinID:CDY50335 | ProteinID:CDY50335.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00096447001 | InterPro:IPR002110 |
| InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF00023 | PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF107 | SMART:SM00248 | SUPFAM:SSF48403 |
| TMHMM:TMhelix | UniParc:UPI0004EEEF14 | SEG:seg | : | : | : |
Description
BnaC01g38300DBnaC01g38300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHB8]
Coordinates
chrLK032902:+:1867..4636
Molecular Weight (calculated)
63961.0 Da
IEP (calculated)
9.815
GRAVY (calculated)
-0.147
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSFADGE KDMVKGGMIL QSTESQNPML DPSPTPSPSA TATAPALVLS NSGKRMDQAG KKKYVKQVTG RHNDTELHLA AQRGDLSAVQ QILKDINSQM
101: EGTLSGEEFD AEVAEIRASI VTEVNELGET ALFTAADKGH LDVVKELLKY SSRESIAKKN RSGYDPLHIA AIQGHHAIVE VLLDHDSTLS HTFGPSNATP
201: LVSAAMRGHT EVVNQLLSKA GNLLEISRSN HKNALHLAAR QGHVDVIKAL LVKDPHLARR VDKKGQTALH MAVKGQSSEV VKLLLDADPA IVMLPDKSCN
301: TALHVATRKK RAEIVELLLS LPDTNANALT RERKTALDIA EGLPLSEESS YIKESLARCG ALRANELNQP RDELRSTVTQ IKNDVHIQLE QTKRTNKNVH
401: NISKELRKLH REGINNATNS VTVVAVLFAT VAFAAIFTVP GGDNNDGSAV VVGRASFKIF FIFNAIALFT SLAVVVVQIT LVRGETKAEK RVVEVINKLM
501: WLASMCTSVA FLASSYIVVG RKNEWAAELV TVVGGVIMAG VLGTMTYYVV KSKRVRSMRK RIKSARRSGS NSWHHSDHSN SEVDPIFAI
101: EGTLSGEEFD AEVAEIRASI VTEVNELGET ALFTAADKGH LDVVKELLKY SSRESIAKKN RSGYDPLHIA AIQGHHAIVE VLLDHDSTLS HTFGPSNATP
201: LVSAAMRGHT EVVNQLLSKA GNLLEISRSN HKNALHLAAR QGHVDVIKAL LVKDPHLARR VDKKGQTALH MAVKGQSSEV VKLLLDADPA IVMLPDKSCN
301: TALHVATRKK RAEIVELLLS LPDTNANALT RERKTALDIA EGLPLSEESS YIKESLARCG ALRANELNQP RDELRSTVTQ IKNDVHIQLE QTKRTNKNVH
401: NISKELRKLH REGINNATNS VTVVAVLFAT VAFAAIFTVP GGDNNDGSAV VVGRASFKIF FIFNAIALFT SLAVVVVQIT LVRGETKAEK RVVEVINKLM
501: WLASMCTSVA FLASSYIVVG RKNEWAAELV TVVGGVIMAG VLGTMTYYVV KSKRVRSMRK RIKSARRSGS NSWHHSDHSN SEVDPIFAI
001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.