Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G387800.2 | Wheat | cytosol | 98.74 | 98.92 |
| TraesCS3D01G348800.2 | Wheat | cytosol | 98.74 | 98.74 |
| HORVU3Hr1G087050.1 | Barley | cytosol | 96.76 | 97.11 |
| Os01t0837000-01 | Rice | cytosol | 90.63 | 90.47 |
| Zm00001d042948_P001 | Maize | cytosol | 89.37 | 89.05 |
| EES03848 | Sorghum | cytosol | 89.19 | 89.03 |
| GSMUA_Achr6P34410_001 | Banana | cytosol | 67.03 | 72.94 |
| KRG92972 | Soybean | cytosol | 66.85 | 63.42 |
| Solyc05g054830.2.1 | Tomato | nucleus | 66.31 | 63.01 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 65.95 | 62.67 |
| KRH36223 | Soybean | cytosol | 66.49 | 62.33 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 65.59 | 61.8 |
| CDY42145 | Canola | cytosol | 64.32 | 61.03 |
| Bra034760.1-P | Field mustard | cytosol | 64.14 | 60.85 |
| Bra038714.1-P | Field mustard | cytosol, plastid | 63.24 | 60.83 |
| AT3G12360.1 | Thale cress | cytosol | 64.32 | 60.51 |
| CDY07932 | Canola | nucleus, plastid | 64.68 | 59.93 |
| CDY50335 | Canola | cytosol | 63.6 | 59.93 |
| CDY50551 | Canola | cytosol | 63.42 | 59.76 |
| VIT_08s0040g02750.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 68.29 | 59.4 |
| Bra001304.1-P | Field mustard | nucleus | 64.68 | 58.95 |
| CDX73985 | Canola | nucleus | 64.68 | 58.95 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 65.05 | 58.79 |
| Solyc10g084550.1.1 | Tomato | plastid | 59.64 | 56.58 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 60.9 | 55.41 |
| CDY08436 | Canola | cytosol | 64.14 | 53.94 |
| TraesCS4A01G102200.2 | Wheat | nucleus | 69.55 | 53.46 |
| TraesCS4A01G102300.1 | Wheat | cytosol | 43.78 | 44.51 |
| TraesCS7A01G265800.1 | Wheat | cytosol | 41.26 | 41.64 |
| TraesCS5A01G305200.1 | Wheat | cytosol | 40.9 | 40.18 |
| GSMUA_Achr9P03090_001 | Banana | cytosol | 50.99 | 33.81 |
| TraesCS7A01G417600.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.16 | 20.99 |
| TraesCS7A01G061700.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 11.35 | 20.93 |
| TraesCS3A01G351100.1 | Wheat | cytosol | 21.62 | 20.8 |
| TraesCS3A01G529700.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.44 | 20.38 |
| TraesCS3A01G537000.1 | Wheat | cytosol, peroxisome, plasma membrane | 12.07 | 18.36 |
| TraesCS5A01G339200.1 | Wheat | plasma membrane | 21.44 | 18.31 |
| TraesCS2A01G219300.4 | Wheat | plastid | 21.44 | 18.28 |
| TraesCS4A01G434700.1 | Wheat | plasma membrane | 21.08 | 18.11 |
| TraesCS6A01G412200.1 | Wheat | cytosol | 14.23 | 18.08 |
| TraesCS2A01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.26 | 18.07 |
| TraesCS5A01G436200.1 | Wheat | plasma membrane | 20.9 | 18.07 |
| TraesCS5A01G338100.1 | Wheat | cytosol | 15.86 | 18.03 |
| TraesCS4A01G427100.1 | Wheat | plasma membrane | 18.92 | 17.62 |
| TraesCS5A01G364500.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.36 | 17.57 |
| TraesCS5A01G185200.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.08 | 17.38 |
| TraesCS2A01G218100.1 | Wheat | cytosol | 18.74 | 17.36 |
| TraesCS6A01G412500.2 | Wheat | plasma membrane | 19.64 | 17.19 |
| TraesCS6A01G412600.1 | Wheat | plastid | 12.61 | 17.11 |
| TraesCS7A01G022100.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.82 | 16.47 |
| TraesCS3A01G358000.2 | Wheat | cytosol | 20.9 | 15.89 |
| TraesCS1A01G044400.1 | Wheat | cytosol | 19.46 | 15.7 |
| TraesCS1A01G013200.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.82 | 15.47 |
| TraesCS2A01G007400.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.18 | 15.45 |
| TraesCS3A01G529300.1 | Wheat | plasma membrane | 12.43 | 14.62 |
| TraesCS7A01G540100.1 | Wheat | cytosol, nucleus, plasma membrane | 18.2 | 13.52 |
| TraesCS7A01G061800.1 | Wheat | cytosol | 4.32 | 9.96 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
| PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 |
| PANTHER:PTHR24177:SF68 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G354800 | EnsemblPlants:TraesCS3A01G354800.1 |
| TIGR:cd00204 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:602686240..602689711
Molecular Weight (calculated)
60448.1 Da
IEP (calculated)
10.014
GRAVY (calculated)
-0.135
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPEIREEGG SGAGTSGGKA MSVSLSGKRG RYVRQVTGRH NDTDLHVAAR AGDAAALRRA LDEAAVVVAV GEGGEQLEAV RRAVAAEANE AGETPLLAAA
101: EKGHLEVVVE LLRHLDSQGV AAKNRSGYDA LHVAAREGHH AVVQEMLRHD RMFAKTFGPA NTTPLISAAT RGHAEVVKLL LEQDDFGLGE MAKDNGKNAL
201: HFAARQGHME IVKALLEKDP QLARRNDKKG QTALHMAVKG TNCDVLRALV DADPAIVMLP DKNGNTALHV ATRKKRAEIV IVLLRLPDTH VNALNRDHKT
301: AFDIAEGLPH CEESSEIKDI LSQHGALRSR ELNQPRDELR KTVTEIKKDV HTQLEQTRKT NKNVHGIAKE LRKLHREGIN NATNSVTVVA VLFATVAFAA
401: IFTVPGGNDN NGVAIVVQTA SFRIFFIFNA IALFTSLAVV VVQITVVRGE TKSERKVVEV INKLMWLASV CTTISFIASC YIVLGRHFQW AAILVSLIGG
501: VTMTGVLGTM TYFVVKSKRM RKIRKKEKMS RRSGSSSWVD NTEISETELN QVYAL
101: EKGHLEVVVE LLRHLDSQGV AAKNRSGYDA LHVAAREGHH AVVQEMLRHD RMFAKTFGPA NTTPLISAAT RGHAEVVKLL LEQDDFGLGE MAKDNGKNAL
201: HFAARQGHME IVKALLEKDP QLARRNDKKG QTALHMAVKG TNCDVLRALV DADPAIVMLP DKNGNTALHV ATRKKRAEIV IVLLRLPDTH VNALNRDHKT
301: AFDIAEGLPH CEESSEIKDI LSQHGALRSR ELNQPRDELR KTVTEIKKDV HTQLEQTRKT NKNVHGIAKE LRKLHREGIN NATNSVTVVA VLFATVAFAA
401: IFTVPGGNDN NGVAIVVQTA SFRIFFIFNA IALFTSLAVV VVQITVVRGE TKSERKVVEV INKLMWLASV CTTISFIASC YIVLGRHFQW AAILVSLIGG
501: VTMTGVLGTM TYFVVKSKRM RKIRKKEKMS RRSGSSSWVD NTEISETELN QVYAL
001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.