Factsheet for TraesCS3A01G529300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G534600.1	Wheat	plasma membrane	87.5	68.15
Os11t0269500-00	Rice	cytosol, peroxisome, vacuole	22.46	54.36
OQU83139	Sorghum	cytosol	21.61	45.54
OQU83144	Sorghum	cytosol	36.65	43.03
Os11t0252400-01	Rice	plasma membrane	51.27	42.76
TraesCS3A01G529700.1	Wheat	cytosol, peroxisome, plasma membrane	50.42	40.75
KXG28091	Sorghum	cytosol, peroxisome, plasma membrane	51.27	40.74
Zm00001d000158_P001	Maize	mitochondrion	47.67	40.54
Os11t0251400-02	Rice	cytosol, peroxisome, plasma membrane	50.0	40.41
TraesCS3B01G598600.1	Wheat	mitochondrion	53.39	39.5
Os11t0253100-00	Rice	cytosol	47.25	36.08
EER89595	Sorghum	cytosol	27.97	34.92
OQU79686	Sorghum	cytosol, peroxisome, plasma membrane	40.25	34.55
Os11t0251200-00	Rice	cytosol	45.34	29.56
TraesCS3A01G351100.1	Wheat	cytosol	24.15	19.76
TraesCS7A01G417600.1	Wheat	cytosol, peroxisome, plasma membrane	23.52	18.94
TraesCS7A01G061800.1	Wheat	cytosol	9.32	18.26
VIT_05s0124g00670.t01	Wine grape	cytosol	21.61	17.62
GSMUA_Achr9P02740_001	Banana	cytosol	21.82	17.55
GSMUA_Achr9P02690_001	Banana	plasma membrane	20.55	16.84
TraesCS3B01G598800.1	Wheat	cytosol	6.14	16.76
VIT_14s0081g00350.t01	Wine grape	cytosol	18.64	16.48
GSMUA_Achr7P12630_001	Banana	cytosol	22.67	16.44
VIT_12s0028g04020.t01	Wine grape	plasma membrane	11.02	16.35
VIT_05s0124g00460.t01	Wine grape	cytosol	9.32	16.3
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.49	15.97
Solyc07g061750.2.1	Tomato	cytosol	19.49	15.86
VIT_19s0014g05330.t01	Wine grape	extracellular	19.28	15.72
VIT_14s0081g00370.t01	Wine grape	cytosol	11.23	15.54
VIT_05s0165g00140.t01	Wine grape	cytosol	15.25	15.45
VIT_05s0020g04750.t01	Wine grape	cytosol, peroxisome, plasma membrane	16.74	15.37
VIT_13s0047g01220.t01	Wine grape	plasma membrane	20.13	15.32
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	18.86	15.29
TraesCS5A01G436200.1	Wheat	plasma membrane	20.34	14.95
AT1G03670.1	Thale cress	cytosol, peroxisome, plasma membrane	19.49	14.94
GSMUA_Achr9P02720_001	Banana	cytosol	12.29	14.91
TraesCS2A01G219300.4	Wheat	plastid	20.55	14.9
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.28	14.87
TraesCS2A01G045300.1	Wheat	cytosol, peroxisome, plasma membrane	20.55	14.85
AT4G03460.1	Thale cress	peroxisome	19.7	14.81
GSMUA_Achr9P02700_001	Banana	cytosol	12.08	14.81
VIT_12s0028g03990.t01	Wine grape	cytosol	18.43	14.67
VIT_05s0102g00030.t01	Wine grape	cytosol	18.22	14.58
VIT_05s0165g00060.t01	Wine grape	cytosol	7.84	14.57
VIT_05s0029g01490.t01	Wine grape	cytosol	14.62	14.5
VIT_05s0102g00050.t01	Wine grape	nucleus	18.43	14.48
TraesCS5A01G185200.1	Wheat	cytosol, peroxisome, plasma membrane	20.55	14.41
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	20.34	14.39
TraesCS2A01G218100.1	Wheat	cytosol	18.22	14.36
VIT_05s0029g01420.t01	Wine grape	cytosol	19.92	14.33
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	15.68	14.31
VIT_05s0165g00290.t01	Wine grape	cytosol	18.22	14.31
TraesCS5A01G339200.1	Wheat	plasma membrane	19.7	14.31
TraesCS4A01G427100.1	Wheat	plasma membrane	18.01	14.26
VIT_05s0029g01540.t01	Wine grape	plasma membrane	20.13	14.24
VIT_12s0059g00050.t01	Wine grape	plasma membrane	19.28	14.06
VIT_05s0102g00060.t01	Wine grape	cytosol, nucleus, plasma membrane	17.37	13.97
TraesCS7A01G061700.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	8.9	13.95
Bra023774.1-P	Field mustard	plasma membrane	18.01	13.93
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	19.7	13.74
TraesCS3A01G358000.2	Wheat	cytosol	21.19	13.7
TraesCS5A01G364500.1	Wheat	cytosol, peroxisome, plasma membrane	18.64	13.69
VIT_12s0059g00090.t01	Wine grape	cytosol	10.38	13.65
VIT_14s0081g00390.t01	Wine grape	cytosol	14.83	13.65
TraesCS4A01G434700.1	Wheat	plasma membrane	18.64	13.62
Bra034209.1-P	Field mustard	cytosol	18.01	13.62
TraesCS2A01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	20.76	13.52
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.07	13.51
VIT_14s0081g00420.t01	Wine grape	cytosol	16.95	13.45
VIT_05s0165g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	18.01	13.43
TraesCS6A01G412500.2	Wheat	plasma membrane	18.01	13.41
VIT_12s0059g00130.t01	Wine grape	cytosol	10.81	13.39
VIT_05s0165g00270.t01	Wine grape	cytosol, mitochondrion, plasma membrane	14.83	13.38
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.7	13.3
TraesCS7A01G265800.1	Wheat	cytosol	15.47	13.27
PGSC0003DMT400071072	Potato	cytosol	10.38	13.24
VIT_12s0059g00060.t01	Wine grape	cytosol	14.41	13.23
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.7	13.19
AT4G03500.1	Thale cress	cytosol, peroxisome, plasma membrane	18.01	13.04
VIT_05s0124g00720.t01	Wine grape	cytosol	10.38	12.89
AT4G14400.1	Thale cress	cytosol, nucleus, peroxisome	18.22	12.84
Bra033416.1-P	Field mustard	cytosol	15.25	12.83
AT4G05040.1	Thale cress	cytosol	15.47	12.76
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.28	12.69
VIT_12s0059g00150.t01	Wine grape	cytosol	10.38	12.66
AT4G03450.1	Thale cress	plasma membrane	17.16	12.64
Bra000823.1-P	Field mustard	plasma membrane	11.86	12.61
TraesCS6A01G412200.1	Wheat	cytosol	11.65	12.59
TraesCS7A01G022100.1	Wheat	cytosol, peroxisome, plasma membrane	17.8	12.57
AT4G03480.1	Thale cress	mitochondrion	17.37	12.44
TraesCS3A01G354800.1	Wheat	cytosol	14.62	12.43
VIT_12s0059g00110.t01	Wine grape	cytosol	10.17	12.4
AT4G14390.1	Thale cress	plasma membrane	18.01	12.25
VIT_05s0029g01430.t01	Wine grape	cytosol, nucleus, plasma membrane	19.92	12.24
TraesCS1A01G013200.1	Wheat	cytosol, peroxisome, plasma membrane	18.43	12.24
TraesCS6A01G412600.1	Wheat	plastid	10.38	11.98
VIT_12s0028g03960.t01	Wine grape	plasma membrane	10.38	11.78
TraesCS1A01G044400.1	Wheat	cytosol	17.16	11.77
TraesCS4A01G102300.1	Wheat	cytosol	13.56	11.72
AT4G03490.3	Thale cress	cytosol, peroxisome, plasma membrane	17.58	11.69
AT4G03470.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	16.74	11.57
TraesCS5A01G305200.1	Wheat	cytosol	13.77	11.5
AT4G03440.1	Thale cress	cytosol	18.01	11.32
VIT_05s0165g00010.t01	Wine grape	nucleus	11.02	11.28
TraesCS5A01G338100.1	Wheat	cytosol	11.65	11.27
TraesCS3A01G537000.1	Wheat	cytosol, peroxisome, plasma membrane	8.69	11.23
VIT_12s0028g04010.t01	Wine grape	cytosol	10.59	11.16
TraesCS7A01G540100.1	Wheat	cytosol, nucleus, plasma membrane	17.58	11.11
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	19.07	10.94
VIT_14s0081g00360.t01	Wine grape	cytosol	9.53	10.71
TraesCS4A01G102200.2	Wheat	nucleus	15.68	10.25
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	18.43	9.82
VIT_12s0059g00120.t01	Wine grape	cytosol	12.71	7.27

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF00023
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF50
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G529300	EnsemblPlants:TraesCS3A01G529300.1	TIGR:cd00204
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:742874826..742877400

Molecular Weight (calculated)

52202.2 Da

IEP (calculated)

8.260

GRAVY (calculated)

0.083

Length

472 amino acids

Sequence
(BLAST)

001: MAANTPTTDA TGGQSSMDER ILKAATFGVF WDIEVLATKS PSILLGVTPQ GNNCLHISTI HGHEEFCLYA LALERSLLEK VNCENETPLV IAVSLGHASL
101: ASKLLQQCCR RPRLSRAILQ QDRYGFNALH HAIRNGHKQL ALDLIAEESA LSRAVTKYTE SPMFIAVMRN YVDVSEKLLD VDDSSDVGQY ERHALHAAAR
201: NGNKVEQCDP RLVAALLSHE SIDPTILDNR GNSAASQLSS ITIDDKTLDW KEVHVLMSKA DPSDDDISLY NLRKGATKQE SIKSRRQRES MTQKYRSNTS
301: LVAILLATIT FTAAFTLPGG YSSDSGNAGL PTMSGKVTFI VFLIFDTLAM CSSFVVAFIC LMGKWEDDKF TTCFIFVTKK LTWFAYLATV TAFSTGLYPV
401: LAPRLQWLAI LICSLVAFFF TLTIFIAKWP SMKLSFRLGQ TLPSMKLSFR LGQTLPSMKL SFRYGAQISA MV

Best Arabidopsis Sequence Match ( AT3G12360.2 )
(BLAST)

001: MEKGGMILLQ SSENQNPMID PSPTPSPSAT ATAPALVLSN SGKRMDQAGK KKYVKQVTGR HNDTELHLAA QRGDLAAVQQ ILKDINSQME GILSGEEFDA
101: EVAEIRASIV NEVNELGETA LFTAADKGHL DVVKELLKYS SRESIAKKNR SGYDPLHIAA IQGHHAIVEV LLDHDATLSQ TFGPSNATPL VSAAMRGHTE
201: VVNQLLSKAG NLLEISRSNN KNALHLAARQ GHVEVIKALL SKDPQLARRI DKKGQTALHM AVKGQSSEVV KLLLDADPAI VMQPDKSCNT ALHVATRKKR
301: AEIVELLLSL PDTNANTLTR DHKTALDIAE GLPLSEESSY IKECLARSGA LRANELNQPR DELRSTVTQI KNDVHIQLEQ TKRTNKNVHN ISKELRKLHR
401: EGINNATNSV TVVAVLFATV AFAAIFTVPG GDNNDGSAVV VGRASFKIFF IFNALALFTS LAVVVVQITL VRGETKAEKR VVEVINKLMW LASMCTSVAF
501: LASSYIVVGR KNEWAAELVT VVGGVIMAGV LGTMTYYVVK SKRTRSMRKK VKSARRSGSN SWHHSDFSNS EVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.