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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G089710.1 Barley cytosol, extracellular 22.36 66.85
Os11t0269500-00 Rice cytosol, peroxisome, vacuole 22.91 64.62
Zm00001d000158_P001 Maize mitochondrion 57.82 57.3
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 61.09 56.57
OQU83144 Sorghum cytosol 39.64 54.23
TraesCS3D01G535100.1 Wheat cytosol, peroxisome, plasma membrane 33.27 53.98
TraesCS1D01G379500.2 Wheat cytosol 55.64 52.31
HORVU3Hr1G115720.2 Barley cytosol, peroxisome, plasma membrane 55.27 52.05
HORVU3Hr1G115640.1 Barley plastid 55.09 51.88
TraesCSU01G140300.1 Wheat cytosol, peroxisome, plasma membrane 53.09 51.87
HORVU6Hr1G000310.2 Barley cytosol, peroxisome 53.82 51.84
TraesCS3A01G529700.1 Wheat cytosol, peroxisome, plasma membrane 54.91 51.71
HORVU3Hr1G115700.1 Barley cytosol, plastid 54.36 51.46
EER89595 Sorghum cytosol 35.27 51.32
TraesCS3D01G533500.1 Wheat cytosol 53.82 50.17
HORVU3Hr1G115520.15 Barley mitochondrion, peroxisome, plastid 53.09 47.56
OQU83151 Sorghum cytosol 12.55 47.26
HORVU3Hr1G115780.11 Barley plastid 53.64 46.97
TraesCS3D01G455500.1 Wheat cytosol 49.45 45.26
TraesCS3D01G534600.1 Wheat plasma membrane 48.0 43.56
TraesCS3A01G529300.1 Wheat plasma membrane 34.55 40.25
OQU83139 Sorghum cytosol 16.18 39.73
OQU83143 Sorghum cytosol 22.91 36.1
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 55.64 32.76
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 19.45 26.42
EER90917 Sorghum cytosol, peroxisome, plasma membrane 24.91 24.64
VIT_14s0081g00350.t01 Wine grape cytosol 23.64 24.34
EER90916 Sorghum cytosol 23.64 23.01
VIT_05s0124g00670.t01 Wine grape cytosol 24.18 22.97
VIT_12s0028g04020.t01 Wine grape plasma membrane 13.27 22.96
GSMUA_Achr7P12630_001 Banana cytosol 27.09 22.89
GSMUA_Achr9P02740_001 Banana cytosol 23.82 22.32
GSMUA_Achr9P02700_001 Banana cytosol 15.45 22.08
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 20.55 21.98
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 22.91 21.88
GSMUA_Achr9P02720_001 Banana cytosol 15.45 21.85
VIT_19s0014g05330.t01 Wine grape extracellular 22.55 21.42
GSMUA_Achr9P02690_001 Banana plasma membrane 22.0 21.01
VIT_12s0059g00130.t01 Wine grape cytosol 14.55 21.0
EES15259 Sorghum cytosol 21.09 20.64
VIT_05s0165g00140.t01 Wine grape cytosol 17.45 20.6
KXG36379 Sorghum cytosol 14.91 20.55
VIT_12s0059g00110.t01 Wine grape cytosol 14.36 20.41
VIT_12s0059g00150.t01 Wine grape cytosol 14.36 20.41
Bra023774.1-P Field mustard plasma membrane 22.55 20.33
OQU89270 Sorghum cytosol 20.55 20.11
VIT_12s0059g00090.t01 Wine grape cytosol 12.91 19.78
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 21.09 19.76
EER97054 Sorghum cytosol 20.18 19.75
EES07299 Sorghum cytosol, plasma membrane 18.91 19.66
VIT_05s0165g00290.t01 Wine grape cytosol 21.45 19.63
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 20.73 19.59
VIT_14s0081g00390.t01 Wine grape cytosol 18.18 19.49
VIT_05s0102g00050.t01 Wine grape nucleus 21.27 19.47
AT4G03460.1 Thale cress peroxisome 22.18 19.43
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 21.27 19.12
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 22.0 19.12
EES03848 Sorghum cytosol 19.27 19.06
VIT_05s0102g00030.t01 Wine grape cytosol 20.36 18.98
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 18.0 18.93
VIT_13s0047g01220.t01 Wine grape plasma membrane 21.27 18.87
EER97319 Sorghum plastid 22.55 18.79
VIT_12s0028g03960.t01 Wine grape plasma membrane 14.18 18.75
Bra000823.1-P Field mustard plasma membrane 15.09 18.69
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 20.91 18.67
VIT_14s0081g00420.t01 Wine grape cytosol 20.18 18.66
PGSC0003DMT400071072 Potato cytosol 12.55 18.65
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 22.55 18.62
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 17.45 18.57
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 22.0 18.5
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 23.45 18.45
VIT_14s0081g00360.t01 Wine grape cytosol 14.0 18.33
KXG36384 Sorghum cytosol 13.27 18.3
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 22.18 18.29
Solyc07g061750.2.1 Tomato cytosol 19.27 18.28
OQU80298 Sorghum mitochondrion, plastid 23.09 18.27
VIT_05s0165g00010.t01 Wine grape nucleus 15.27 18.22
VIT_05s0124g00720.t01 Wine grape cytosol 12.55 18.16
VIT_05s0029g01420.t01 Wine grape cytosol 21.64 18.14
OQU84849 Sorghum plasma membrane 20.91 18.05
VIT_12s0028g03990.t01 Wine grape cytosol 19.45 18.04
EER95066 Sorghum cytosol 18.36 17.81
OQU84108 Sorghum cytosol, nucleus, plasma membrane 24.55 17.74
EES18294 Sorghum plasma membrane 22.55 17.74
VIT_05s0029g01540.t01 Wine grape plasma membrane 21.45 17.69
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 20.0 17.54
VIT_12s0059g00060.t01 Wine grape cytosol 16.36 17.51
VIT_12s0059g00050.t01 Wine grape plasma membrane 20.55 17.47
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 20.55 17.33
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 21.27 17.31
Bra033416.1-P Field mustard cytosol 17.64 17.29
EER88274 Sorghum cytosol 23.82 17.28
OQU78058 Sorghum plasma membrane 19.45 17.09
AT4G14390.1 Thale cress plasma membrane 21.45 17.0
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 20.73 16.84
VIT_05s0029g01490.t01 Wine grape cytosol 14.55 16.81
AT4G05040.1 Thale cress cytosol 17.45 16.78
Bra034209.1-P Field mustard cytosol 18.73 16.51
AT4G03450.1 Thale cress plasma membrane 19.09 16.38
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 19.82 16.27
EER87702 Sorghum nucleus 21.64 16.17
VIT_05s0165g00060.t01 Wine grape cytosol 7.45 16.14
VIT_14s0081g00370.t01 Wine grape cytosol 10.0 16.13
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 20.55 16.03
EER87700 Sorghum cytosol 23.27 15.88
KXG27928 Sorghum plasma membrane 18.91 15.66
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 20.18 15.63
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 21.45 15.36
EER96593 Sorghum plasma membrane 13.27 15.08
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 16.91 15.07
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 19.64 15.06
AT4G03480.1 Thale cress mitochondrion 18.0 15.02
EER95067 Sorghum cytosol, nucleus, plasma membrane 18.55 14.83
VIT_05s0124g00460.t01 Wine grape cytosol 7.27 14.81
VIT_12s0028g04010.t01 Wine grape cytosol 11.64 14.29
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 17.09 13.76
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 20.36 13.61
AT4G03440.1 Thale cress cytosol 18.55 13.58
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 20.18 12.53
VIT_12s0059g00120.t01 Wine grape cytosol 14.18 9.45
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1Z5R8I2InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:OQU79686ProteinID:OQU79686ProteinID:OQU79686.1
PFAM:PF12796PFAM:PF13637PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24177PANTHER:PTHR24177:SF50SMART:SM00248EnsemblPlantsGene:SORBI_3008G179400SUPFAM:SSF48403TMHMM:TMhelix
UniParc:UPI000B8B9678SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:+:61295957..61298354
Molecular Weight (calculated)
61167.2 Da
IEP (calculated)
7.000
GRAVY (calculated)
0.095
Length
550 amino acids
Sequence
(BLAST)
001: MPRMDKDLLQ AAIYGDSRKL QNMVAEKGLD VLLGTTQAGN TCLHIASIHG HREFCMDVLH QNRSLITAFN DDGETPLLAA ITRGHTSLAS FFLHFCLNHG
101: HRDAIFDHRE LAMELIRAVP EMSRAVNSYD ESPMFISVMR DYEDITKLLL EIEDSAHGGT SGFNALHAAV RNGNSGIAKM IIEKRPDLST EENGYRNTAV
201: EQAVFLNKID VLKVLLEHDW SLGYSVSTSG SPLLVSAAQR GYVGVARELL KHCPDAPYCD RNGWTCLHEA VLSGHTEFVE FVMGSQQLRN KLVNMRSEVG
301: KTALHYAVEK CNPRILQALL LNHTTTDFTM ISSYGREPSS GLLTEKEPPN KISDWNEVSM VLLQKDPNNA SFVYYIHKCV KDMVTNASSK AFKSLTQTLI
401: GNTFLVAILI ATITFAAAFT LPGGYNSEGL PTMARKAAFQ AFLISDTLAM CSSLAVAFIC IIARWEDIGF LLYYRSFTKK LMWLSYMATT TAFATGLYTV
501: LAPRLLWLAI AVCTLPVLLP IFTKLLDELP FLSLRLRLGR TFKSELLDIV
Best Arabidopsis Sequence Match ( AT4G03500.2 )
(BLAST)
001: MGRPDVHLDR RVAENHQAIP RNNVRSTPSL DLSTLFDETS ETKPMDPKTM AAVRAGKENY LRSNNSYISV APTLVNDRGN TILHLAASSG HVSLVRYIIQ
101: KCPGLLLKSN MMGEVALHLA AEAGHLDVVW NLIDFINDIS CTNLPVAKRI YFAKNKNQDT ALHVALKGKH EVVASYLVSA AKSLSFVANR DGFSPLYLAI
201: EAGHTSLVTT MCHGTNELSS KVGGRSIVHA ALKANRKDIL DALLSKDASL INLRDEGRTS LSFGASIGYY QGFSYLFDKN RDKVYVSDDD GLFPTHMAAK
301: YGHVQILEEI LKHCPEAIEL LDRDGQNILH LAAKYGKLKV IKFILSCCKD KNKKKLINEQ DVNGNTPLHL ATINWHPKVV SMFTWDHRVD LKKRNYIGFT
401: ALDVAEENID SSYIVHQRLT WMALINAGAP KSSTPITENL RSFKKPDGGK YKDRVNTLML VATLVATMTF TAGFTLPGGY NDSFPHLGMA VLAKRTAFQV
501: FLVCDTLAMY SSIITIVALI WAQLGDLSII LKAFNIALPF LGLALTSMSI AFMAGTYVAV SHLPLLGYFV LGIGIIFLLV LLLLLVPYVS PYAHAQPLLR
601: HIFYYPYFLK LLAAGDNKNI VDVYTASDE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.